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MIA Paris

Publications de Tristan Mary-Huard

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ACL

Articles dans des revues internationales ou nationales avec comité de lecture répertoriées dans les bases de données

[2014, article]C. Lévy-Leduc, M. Delattre, T. Mary-Huard, and S. Robin, "Two-dimensional segmentation for analyzing HiC data," Bioinformatics, p. i, 2014.

[2014, article | pdf]S. Gey and T. Mary-Huard, "Risk Bounds for Embedded Variable Selection in Classification Trees," IEEE Trans. Inf. Theo., vol. 60, iss. 3, 2014.

[2013, article]G. Leroy, T. Mary-Huard, E. Verrier, S. Danvy, E. Charvolin, and C. Danchin-Burge, "Methods to estimate effective population size using pedigree data: Examples in dog, sheep, cattle and horse.," Genet. Sel. Evol., vol. 45, iss. 1, 2013.

[2013, article]F. Wurmser, T. Mary-Huard, J. Daudin, D. Joly, and C. Montchamp-Moreau, "Variation of Gene Expression Associated with Colonisation of an Anthropized Environment: Comparison between African and European Populations of Drosophila simulans," PloS one, vol. 8, iss. 11, p. 79750, 2013.

[2012, article]T. Mary-Huard, F. Jaffrezic, and S. Robin, "ExactDAS: An Exact Test Procedure for the Detection of Differential Alternative Splicing in Microarray Experiments," Stat. Appl. Genet. Mol. Biol., vol. 11, iss. 5, 2012.

[2011, article]A. Célisse and T. Mary-Huard, "Exact Cross-Validation for kNN and applications to passive and active learning in classification.," JSFDS, vol. 152, iss. 3, 2011.

[2011, article | www]F. Wurmser, D. Ogereau, T. Mary-Huard, B. Loriod, D. Joly, and C. Montchamp-Moreau, "Population transcriptomics: insights from Drosophila simulans, Drosophila sechellia and their hybrids," Genetica, vol. 139, iss. 4, pp. 465-477, 2011.

[2011, article | www]F. Roudier, I. Ahmed, C. Bérard, A. Sarazin, T. Mary-Huard, and al., "Integrative epigenomic mapping defines four main chromatin states in Arabidopsis," The EMBO Journal, vol. 30, pp. 1928-1938, 2011.

[2009, article | www]T. Mary-Huard and S. Robin, "Tailored Aggregation for Classification," IEEE Trans. Pattern Anal. and Machine Intel., vol. 31, iss. 8, 2009.

[2008, article | www]J.-J. Daudin and T. Mary-Huard, "Estimation of the conditional risk in classification: The swapping method," "Comp. Stat. and Data Anal.", vol. 52, p. 3220–-3232, 2008.

[2008, article | www]T. Mary-Huard, J. Aubert, N. Mansouri-Attia, O. Sandra, and J.-J. Daudin, "Statistical methodology for the analysis of dye-switch microarray experiments," BMC Bioinformatics, vol. 9, iss. 98, 2008.

[2008, article | www]M.-L. Martin-Magniette, T. Mary-Huard, C. Bérard, and S. Robin, "ChIPmix: Mixture model of regressions for two-color ChIP-chip analysis," Bioinformatics, vol. 24, pp. 181-86, 2008.

[2007, article | www]T. Mary-Huard, J.-J. Daudin, M. Baccini, A. Biggeri, and A. Bar-Hen, "Biases induced by pooling samples in microarray experiments," Bioinformatics, vol. 23, iss. 13, 2007.

[2007, article]T. Mary-Huard, S. Robin, and J.-J. Daudin, "A penalized criterion for variable selection in classification," J. Mult. Anal., vol. 98, iss. 4, pp. 695-705, 2007.

[2006, article | www]E. Lebarbier and T. Mary-Huard, "Une introduction au critère BIC : fondements théoriques et interprétation," Journal de la SFdS, vol. 147, iss. 1, pp. 39-57, 2006.

[2004, article | www]T. Mary-Huard, S. Robin, J. J. Daudin, F. Bitton, E. Cabannes, and P. Hilson, "Spotting effect in microarray experiments," BMCB, vol. 5, iss. 63, pp. 1-9, 2004.

ACT

Communications avec actes dans un congrès international ou national

[2012, inproceedings | www]T. Mary-Huard, F. Jaffrézic, and S. Robin, "ExactDAS: An exact test procedure for the detection of differential alternative splicing," in Proc. 4th International Conference on Bioinformatics and Computational Biology (BICoB), Las Vegas, 2012.

[2011, inproceedings | www | pdf]S. Mary-Huard T. Gey, "Embedded Variable Selection in Classification Trees," in Proc. Symposium of the International Federation of Classification Societies, Francfort, Germany, 2011.

[2010, inproceedings | www | pdf]T. Mary-Huard, M.-L. Martin-Magniette, C. Berard, and S. Robin, "Statistical methodology for the analysis of multi-sample ChIP-chip experiments," in Proc. International Biometric Conference, Florianopolis, 2010.

[2010, inproceedings | www | pdf]T. Mary-Huard, M. L. Martin-Magniette, C. Berard, and S. Robin, "Statistical methodology for the analysis of multi-sample ChIP-chip experiments," in Proc. International Biometric Conference, Florianopolis, Bresil, 2010.

[2009, inproceedings | www]T. Mary-Huard and S. Robin, "Wrapper aggregation for classification," in Proc. XIIIth Applied Stochastic Models and Data Analysis International Conference, Vilnius, 2009.

[2009, inproceedings | www | pdf]T. Mary-Huard, E. Lebarbier, and S. Robin, "A statistical approach to detect chromosomal domains of gene expression," in Proc. International Federation of Classification Societies 2009 Conference, Dresde, Allemagne, 2009.

[2009, inproceedings | www]T. Mary-Huard, E. Lebarbier, and S. Robin, "A clustering method for ordered variables to detect up-correlated genomic regions," in Proc. International Workshop on Statistical Modeling, Ithaca, USA, 2009.

[2008, inproceedings | www | pdf]T. Mary-Huard, M. L. Martin-Magniette, C. Bérard, and S. Robin, "ChIPmix: Mixture model of regressions for two-color ChIP-chip analysis," in Proc. European Conference of Computational Biology, Cagliari, 2008.

[2008, inproceedings | www | pdf]T. Mary-Huard, J. Aubert, N. Mansouri-Attia, O. Sandra, and J. J. Daudin, "Statistical methodology for the analysis of dye-switch microarray experiments," in Proc. International Biometric Conference, Dublin, 2008.

[2007, inproceedings | www | pdf]T. Mary-Huard, J.-J. Daudin, M. Baccini, A. Biggeri, and A. Bar-Hen, "Biases induced by pooling samples in microarray experiments," in Proc. European Conference of Computational Biology, Vienna, 2007.

[2006, inproceedings | www]T. Mary-Huard and S. Robin, "Compression pour la classification supervisée," in Proc. Journées MAS de la SMAI, Lille, 2006.[2005, inproceedings]T. Mary-Huard and S. Robin, "Sélection de variables en Classification supervisée," in Proc. XXXVII Journées de la SFdS, Pau, 2005.

[2005, inproceedings]T. Mary-Huard and J. J. Daudin, "Model Selection in Classification : the Swapping Method," in Proc. International Symposium on Applied Stochastic Models and Data Analysis, Brest, 2005.

[2003, inproceedings]T. Mary-Huard, J. J. Daudin, and S. Robin, "Modèles de normalisation spatiale et choix de modèle pour les données de puce à ADN," in Proc. XXXVème Journées de la Statistique, Lyon, 2003.

[2003, inproceedings]T. Mary-Huard, J. J. Daudin, and S. Robin, "Spotting effects in cDNA experiments," in Proc. European Conference of Computational Biology, Paris, 2003.

COM

Communications orales sans actes dans un congrès international ou national

[2010, inproceedings]A. Mary-Huard T. Celisse, "Exact Cross-Validation for k-NN in binary classification, applications to passive and active learning," in Proc. 3rd International Conference of the ERCIM WG, Londres, Angleterre, 2010.

[2009, inproceedings]T. Mary-Huard and S. Robin, "Wrapper aggregation for large dataset classification," in Proc. Statistical Methods for Post-genomic Data Workshop, Paris, 2009.

[2007, inproceedings]T. Mary-Huard, M. L. Martin-Magniette, C. Berard, and S. Robin, "Mixture model of regressions for ChIP-chip experiment analysis," in Proc. International Workshop on Machine Learning in Systems Biology, Evry, 2007.

ChOS

Chapitres d'ouvrages

[2011, inbook]T. Mary-Huard and S. Robin, "Introduction to Statistical Methods for Complex Systems," , M. Stumpf D. J. Balding, G. M., Ed., Wiley, 2011, pp. 15-38.

[2006, inbook]T. Mary-Huard, F. Picard, and S. Robin, "Introduction to Statistical Methods for Microarray Data Analysis," , Paris, E. H., Ed., , 2006.

Mémoires de thèses

[2006, phdthesis | www | pdf]T. Mary-Huard, "Réduction de la dimension et sélection de modèles en classification supervisée," PhD Thesis , 2006.