Les références antérieures peuvent être consultées sur la base de données ProdINRA** **

**2015**

[2015, article | www]

R. Zaag, JP. Tamby, C. Guichard, Z. Tariq, G. Rigaill, E. Delannoy, JP Renou, S. Balzergue, T. Mary-Huard, S. Aubourg, M.-L. Martin-Magniette, et V. Brunaud, "GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response", Nucleic Acids Res vol. 43 Database issue

[2015, article | www]

A. Rau, C. Maugis-Rabusseau, M.-L. Martin-Magniette, et G. Celeux, "Co-expression analysis of high-throughput transcriptome sequencing data with Poisson mixture models", Bioinformatics vol. 31, iss. 9 pp. 1420-1427, 2015.

[2015, article | www]

P. Doukhan, A. Jakubowski, et G. Lang, "Phantom distribution functions for some stationary sequences", Extremes, vol. 18, iss. 4, pp. 697-725, 2015.

[2015, article | www]

E. Gassiat, A. Cleynen, and S. Robin, "Inference in finite state space non parametric Hidden Markov Models and applications," Statistics and Computing, pp. 1-11, 2015.

[2015, article | www]

P. Doukhan, G. Lang, A. Leucht, and M. Neumann, "Dependent wild bootstrap for the empirical process," Journal of Time series Analysis, vol.36, iss.3, pp. 290-314, 2015.

[2015, article | www]

J. Leger, J. Daudin, and C. Vacher, "Clustering methods differ in their ability to detect patterns in ecological networks," Methods in Ecology and Evolution, 2015.

[2015, article]

L. Pujol, I. Albert, C. Magras, N. B. Johnson, and J.-M. Membré, "Probabilistic exposure assessment model to estimate aseptic-UHT product failure rate," International Journal of Food Microbiology, vol. 192, pp. 124-141, 2015.

[2015, article | www]

P. Doukhan and G. Lang, "Weak dependence of point processes and application to second order statistics," in revision in Statistics, 2015.

[2015, article | www]

E. Marcon, S. Traissac, F. Puech, and G. Lang, "Distance-Based Measures of Spatial Structures: dbmss, a Spatial Statistics R Package," Journal of Statistical Software, vol. 67, code snippet 3, 2015.

[2015, article | www]

P. Bertail, S. Clémençon, and J. Tressou, "Bootstrapping Robust Statistics for Markovian Data Applications to Regenerative R- and L-Statistics," Journal of Time Series Analysis, iss. Bootstrap Special Issue, vol. 36, iss. 3, pp 462--480, 2015.

**2014**

[2014, article | www]

M. Delattre, M. Lavielle, and M.-A. Poursat, "A note on BIC in mixed effects models," EJS, vol. 8, pp. 456-475, 2014.

[2014, article | www]

C. Matias and S. Robin, "Modeling heterogeneity in random graphs through latent space models: a selective review," ESAIM: Proc., vol. 47, pp. 55-74, 2014.

[2014, article]

O. Gimenez, S. T. Buckland, B. J. T. Morgan, N. Bez, S. Bertrand, R. Choquet, S. Dray, M.-P. Etienne, R. Fewster, F. Gosselin, B. Mérigot, P. Monestiez, J. M. Morales, F. Mortier, F. cois Munoz, O. Ovaskainen, S. Pavoine, R. Pradel, F. M. Schurr, L. Thomas, W. Thuiller, V. Trenkel, P. de Valpine, and E. Rexstad, "Statistical ecology comes of age," Biology Letters, vol. 10, iss. 12, 2014.

[2014, article]

C. Lévy-Leduc, M. Delattre, T. Mary-Huard, and S. Robin, "Two-dimensional segmentation for analyzing HiC data," Bioinformatics, p. i, 2014.

[2014, article | www]

P. Gloaguen, S. Mahévas, E. Rivot, M. Woillez, J. Guitton, Y. Vermard, and M.-P. Etienne, "An autoregressive model to describe fishing vessel movement and activity," Environmetrics, 2014.

[2014, article | www]

M. Bourdat-Deschamps, S. Leang, N. Bernet, J.-J. Daudin, and S. Nélieu, "Multi-residue analysis of pharmaceuticals in aqueous environmental samples by online solid-phase extraction–ultra-high-performance liquid chromatography-tandem mass spectrometry: Optimisation and matrix effects reduction by quick, easy, cheap, effective, rugged and safe extraction," Journal of Chromatography A, vol. 1349, pp. 11-23, 2014.

[2014, article]

C. Rigaux, S. André, I. Albert, and F. Carlin, "Quantitative assessment of the risk of microbial spoilage in foods. Prediction of non-stability at 55°C caused by Geobacillus stearothermophilus in canned green beans," International Journal of Food Microbiology, vol. 171, pp. 119-128, 2014.

[2014, article | www]

A. Cleynen and S. Robin, "Comparing change-point location in independent series," Statistics and Computing, pp. 1-14, 2014.

[2014, article | www]

A. Cleynen, M. Koskas, E. Lebarbier, G. Rigaill, and S. Robin, "Segmentor3IsBack: an R package for the fast and exact segmentation of Seq-data," Algorithms for Molecular Biology, vol. 9, iss. 1, p. 6, 2014.

[2014, article | pdf]

S. Gey and T. Mary-Huard, "Risk Bounds for Embedded Variable Selection in Classification Trees," IEEE Trans. Inf. Theo., vol. 60, iss. 3, 2014.

[2014, article | www]

E. Marcon, I. Scotti, B. Herault, V. Rossi, and G. Lang, "Generalization of the partitioning of the Shannon and other orders of diversity," PLoS ONE, vol. 9, iss. 3, p. 90289, 2014.

L. Orseau, "Universal knowledge-seeking agents," Theoretical Computer Science, vol. 519, pp. 127-139, 2014.

[2014, article | www]

E. Vaudour, J. M. Gilliot, L. Bel, L. Bréchet, D. Hadjar, J. Hamiache, and Y. Lemonnier, "Uncertainty of soil reflectance retrieval from SPOT and RapidEye multispectral satellite images using a per-pixel bootstrapped empirical line atmospheric correction over an agricultural region.," International Journal of Applied Earth Observation and Geoinformation, iss. 26, pp. 217-234, 2014.

[2014, article | www]

Celeux G, Martin-Magniette ML, Maugis-Rabusseau C, Raftery AE. "Comparing Model Selection and Regularization Approaches to Variable Selection in Model-Based Clustering.", J Soc Fr Statistique vol. 155 iss. 2 pp. 57-71.

[2014, article | www]

Lange H, Zuber H, Sement FM, Chicher J, Kuhn L, Hammann P, Brunaud V, Bérard C, Bouteiller N, Balzergue S, Aubourg S, Martin-Magniette ML, Vaucheret H, Gagliardi D, "The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana.", PLoS Genet. 2014 Aug 21;10(8):e1004564

[2014, article | www]

Pasquet JC, Chaouch S, Macadré C, Balzergue S, Huguet S, Martin-Magniette ML, Bellvert F, Deguercy X, Thareau V, Heintz D, Saindrenan P, Dufresne M., "Differential gene expression and metabolomic analyses of Brachypodium distachyon infected by deoxynivalenol producing and non-producing strains of Fusarium graminearum." BMC Genomics. 2014 Jul 25;15:629.

[2014, article | www]

Frei dit Frey N, Garcia AV, Bigeard J, Zaag R, Bueso E, Garmier M, Pateyron S, de Tauzia-Moreau ML, Brunaud V, Balzergue S, Colcombet J, Aubourg S, Martin-Magniette ML, Hirt H. "Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences.", Genome Biol. 2014 Jun 30;15(6):R87

[2014, article | www]

Bourion V, Martin C, de Larambergue H, Jacquin F, Aubert G, Martin-Magniette ML, Balzergue S, Lescure G, Citerne S, Lepetit M, Munier-Jolain N, Salon C, Duc G. "Unexpectedly low nitrogen acquisition and absence of root architecture adaptation to nitrate supply in a Medicago truncatula highly branched root mutant." J Exp Bot. 2014 Jun;65(9):2365-80.

Celton JM, Gaillard S, Bruneau M, Pelletier S, Aubourg S, Martin-Magniette ML, Navarro L, Laurens F, Renou JP. "Widespread anti-sense transcription in apple is correlated with siRNA production and indicates a large potential for transcriptional and/or post-transcriptional control." New Phytol. 2014 Jul;203(1):287-99. doi: 10.1111/nph.12787

Garcia AV, Charrier A, Schikora A, Bigeard J, Pateyron S, de Tauzia-Moreau ML, Evrard A, Mithöfer A, Martin-Magniette ML, Virlogeux-Payant I, Hirt H. "Salmonella enterica flagellin is recognized via FLS2 and activates PAMP-triggered immunity in Arabidopsis thaliana." Mol Plant. 2014 Apr;7(4):657-74

**2013**

[2013, article | www]

J.-B. Lecomte, H. P. Benoît, S. Ancelet, M.-P. Etienne, L. Bel, and E. Parent, "Compound Poisson-gamma vs. delta-gamma to handle zero-inflated continuous data under a variable sampling volume," Methods in Ecology and Evolution, vol. 4, p. 1159, 2013.

[2013, article]

L. Pujol, I. Albert, N. B. Johnson, and J.-M. Membré, "Potential application of quantitative microbiological risk assessment techniques to an aseptic-UHT process in the food industry," International Journal of Food Microbiology, vol. 162, pp. 283-296, 2013.

[2013, article | www]

M. C. Faure, J. C. Sulpice, M. Delattre, M. Lavielle, M. Prigent, M. H. Cuif, C. Melchior, E. Tschirhart, O. Nusse, and S. Dupré-Crochet, "The recruitment of p47phox and Rac2G12V at the phagosome is transient and phosphatidylserine dependent," Biology of the Cell, vol. 105, pp. 1-18, 2013.

[2013, article]

C. Rigaux, J.-B. Denis, A. I., and F. Carlin, "A meta-analysis accounting for sources of variability to estimate heat resistance reference parameters of bacteria using hierarchical Bayesian modeling: estimation of D at 121.1 °C and pH 7, zT and zpH of Geobacillus stearothermophilus," International Journal of Food Microbiology, vol. 161, pp. 112-120, 2013.

[2013, article]

L. Guillier, J.-M. Kabunda, J.-B. Denis, and I. Albert, "Elicitation for food microbial risk assessment: a probabilistic approach extending Risk Ranger proposal," Journal de la Société française de statistiques, vol. 154, iss. 3, pp. 113-123, 2013.

[2013, article | www]

M. Delattre and M. Lavielle, "Coupling the SAEM algorithm and the extended Kalman filter for maximum likelihood estimation in mixed-effects diffusion models.," Statistics and Its Interface, vol. 6, iss. 4, pp. 519-532, 2013.

[2013, article | www]

M. Delattre, V. Genon-Catalot, and A. Samson, "Maximum Likelihood Estimation for Stochastic Differential Equations with Random Effects," Scandinavian Journal of Statistics, vol. 40, iss. 2, pp. 322-343, 2013.

[2013, article]

A. Vincent-Salomon, V. Benhamo, E. Gravier, G. Rigaill, N. Gruel, S. Robin, Y. de Rycke, O. Mariani, G. Pierron, D. Gentien, and others, "Genomic Instability: A Stronger Prognostic Marker Than Proliferation for Early Stage Luminal Breast Carcinomas," PloS one, vol. 8, iss. 10, p. 76496, 2013.

[2013, article]

A. Cleynen, S. Dudoit, and S. Robin, "Comparing Segmentation Methods for Genome Annotation Based on RNA-Seq Data," Journal of Agricultural, Biological, and Environmental Statistics, pp. 1-18, 2013.

[2013, article | www]

A. Bechler, T. Romary, N. Jeannée, and Y. Desnoyers, "Geostatistical sampling optimization of contaminated facilitie," Stochastic Environmental Research and Risk Assessment, vol. 731, pp. 1-8, 2013.

[2013, article | www]

N. Commeau and S. Jaloustre, "Impact of temperature sampling strategy on the risk of Clostridium growth: Application to rapid cooling of food in institutional food service facilities," Food control, vol. 30, iss. 2, pp. 642-648, 2013.

[2013, article | www]

C. Durot, S. Huet, F. Koladjo, and S. Robin, "Least-squares estimation of a convex discrete distribution," Computational Statistics & Data Analysis, vol. 67, pp. 282-298, 2013.

[2013, article | www]

N. Eckert, C. Keylock, H. Castebrunet, A. Lavigne, and M. Naaim, "Temporal trends in avalanche activity in the French Alps and subregions: from occurrences and runout altitudes to unsteady return periods," Journal of Glaciology, vol. 59, iss. 213, pp. 93-114, 2013.

[2013, article | www]

J. Gaume, N. Eckert, G. Chambon, M. Naaim, and L. Bel, "Mapping extreme snowfalls in the french alps using max-stable processes," Water Resources Research, 2013.

[2013, article | www]

E. Vaudour, L. Bel, J. M. Gilliot, Y. Coquet, D. Hadjar, P. Cambier, J. Michelin, and S. Houot, "Potential of SPOT multispectral satellite images for mapping topsoil organic carbon content over peri-urban croplands," Soil Science Society of America Journal, vol. 77, pp. 2122-2139, 2013.

[2013, article | www]

C. Houel, M.-L. Martin-Magniette, S. D. Nicolas, T. Lacombe, L. Le Cunff, D. Franck, L. Torregrosa, G. Conéjéro, S. Lalet, P. This, and A.-F. Adam-Blondon, "Genetic variability of berry size in the grapevine (Vitis vinifera L.)," Australian Journal of Grape and Wine Research, vol. 19, iss. 2, pp. 208-220, 2013.

[2013, article | www]

O. Kouamo, C. Lévy-Leduc, and E. Moulines, "Central limit theorem for the robust log-regression wavelet estimation of the memory parameter in the Gaussian semi-parametric context," Bernoulli, vol. 19, iss. 1, pp. 172-204, 2013.

[2013, article | www]

L. Lagache, J. B. Leger, J. J. Daudin, R. Petit, and C. Vacher, "Putting the Biological Species Concept to the Test: Using Mating Networks to Delimit Species," PLOS ONE, 2013.

[2013, article | www]

T. Lagache, Olivo-Marin J.-C., and G. Lang, "Analysis of the spatial organization of proteins with robust statistics," PLoS ONE : e80914, vol. 8, iss. 12, 2013.

G. Lang and E. Marcon, "Testing randomness of spatial point patterns with the Ripley statistic," ESAIM: Probability and Statistics, vol. 17, pp. 767-788, 2013.

[2013, article | www]

J. B. Lecomte, H. P. Benoît, M. P. Etienne, L. Bel, and E. Parent, "Modeling the habitat associations and spatial distribution of benthic macroinvertebrates: A hierarchical Bayesian model for zero-inflated biomass data," Ecological Modelling, 2013.

[2013, article | www]

J. B. Leger, C. Vacher, and J. J. Daudin, "Detection of structurally homogeneous subsets in graphs," Stat. Comput., 2013.

[2013, article]

G. Leroy, T. Mary-Huard, E. Verrier, S. Danvy, E. Charvolin, and C. Danchin-Burge, "Methods to estimate effective population size using pedigree data: Examples in dog, sheep, cattle and horse.," Genet. Sel. Evol., vol. 45, iss. 1, 2013.

[2013, article | www]

C. Lévy-Leduc and M. Taqqu, "Hermite ranks and U-statistics," Metrika, 2013.

[2013, article | www]

C. Lévy-Leduc and M. Taqqu, "Long-range dependence and the ranks of decompositions," AMS Contemporary Mathematics Series, 2013.

[2013, article | www]

E. Marcon, S. Traissac, and G. Lang, "A Statistical Test for Ripley’s K Function Rejection of Poisson Null Hypothesis," IRSN Ecology, 2013.

[2013, article | www]

O. Mestre, P. Domonkos, F. Picard, I. Auer, S. Robin, E. Lebarbier, R. Böhm, E. Aguilar, J. Guijarro, G. Vertachnik, M. Klancar, D. B., and P. Stepanek, "HOMER : a homogenization software - methods and applications," Quarterly Journal of the Hungarian Meteorological Service, vol. 117, iss. 1, pp. 47-67, 2013.

[2013, article | www]

S. Robin and V. T. Stefanov, "Detection of significant genomic alterations via simultaneous minimal sojourns at a state by independent continuous-time Markov chains," Methodology and Computing in Applied Probability, 2013.

[2013, article]

C. Rigaux, S. Ancelet, F. Carlin, C. Nguyen-thé, and I. Albert, "Inferring an augmented Bayesian network to confront a complex quantitative microbial risk assessment model with durability studies: Application to Bacillus cereus on a courgette purée production chain," Risk Analysis, vol. 33, iss. 5, pp. 877-892, 2013.

[2013, article | www]

F. Tenehaus-Azziza, M. Alesque, J. J. Daudin, and M. Sanaa, "Risk-Based approach for microbial food safety management in dairy industry. The case of Listeria Monocytogenes in soft cheese made from pasteurized milk," Risk Analysis, 2013.

[2013, article | www]

Bérard C, Seifert M, Mary-Huard T, Martin-Magniette ML. "MultiChIPmixHMM: an R package for ChIP-chip data analysis modeling spatial dependencies and multiple replicates." BMC Bioinformatics. 2013 Sep 9;14:271.

[2013, article]

S. Volant, C. Bérard, M.-L. Martin-Magniette, and S. Robin, "Hidden Markov Models with mixtures as emission distributions," Stat. Comput., 2013.

[2013, article]

F. Wurmser, T. Mary-Huard, J. Daudin, D. Joly, and C. Montchamp-Moreau, "Variation of Gene Expression Associated with Colonisation of an Anthropized Environment: Comparison between African and European Populations of Drosophila simulans," PloS one, vol. 8, iss. 11, p. 79750, 2013.

L. Orseau, "Asymptotic non-learnability of universal agents with computable horizon functions," Theoretical Computer Science, vol. 473, pp. 149-156, 2013.

F. Héraud, C. Béchaux, M.-E. Gouze, S. Pierlot, A. Fastier, J.-C. Leblanc, L. L. H\'. egarat, N. Takakura, V. Fessard, J. Tressou, R. Maximilien, D. G. Sousa, A. Nawaz, N. Zucchini-Pascal, R. Rahmani, M. Audebert, V. Graillot, and J.-P. Cravedi, "The PERICLES research program: an integrated approach to characterize the combined effects of mixtures of pesticide residues to which the French population is exposed," Toxicology, vol. 313, iss. 2-3, pp. 83-93, 2013.

A. Crépet, J. Tressou, V. Graillot, C. Béchaux, S. Pierlot, F. Héraud, and J. C. Leblanc, "Identification of the main pesticide residue cocktails to which the French population is exposed," Environmental Research, vol. 126, pp. 125-133, 2013.

P. Bertail, S. Clémençon, and J. Tressou, "Regenerative Block-Bootstrap Confidence Intervals for the Tail and Extremal Indexes," Electronic Journal of Statistics, vol. 7, pp. 1224-1248, 2013.

C. Béchaux, J. Tressou, F. Héraud, J. Leblanc, M. Zetlaoui, and A. Crépet, "Identification of pesticide mixtures and connection between combined exposure and diet," Food Chemical and Toxicology, vol. 59, pp. 191-198, 2013.

**2012**

[2012, article]

A. Celisse, J.-J. Daudin, and L. Pierre, "Consistency of maximum-likelihood and variational estimators in the Stochastic Block Model," Electron. J. Statis., vol. 6, pp. 1847-99, 2012.

[2012, article]

N. Commeau, M. Cornu, I. Albert, J.-B. Denis, and E. Parent, "Hierarchical Bayesian models to assess between- and within-batch variability of Pathogen Contamination in Food," Risk Analysis, vol. 32, pp. 395-415, 2012.

[2012, article | www]

J. B. Lecomte and C. Laplanche, "A length-based hierarchical model of brown trout (Salmo trutta fario) growth and production," Biometrical Journal, vol. 54, iss. 1, p. 108, 2012.

[2012, article | www]

C. Maugis-Rabusseau, M.-L. Martin-Magniette, and S. Pelletier, "SelvarClustMV: Variable selection approach in model-based clustering allowing for missing values," Journal de la Société Française de Statistiques, vol. 153, iss. 2, 2012.

[2012, article | www]

A. Celisse, J.-J. Daudin, and L. Pierre, "Consistency of maximum-likelihood and variational estimators in the stochastic block model," Electronic Journal of Statistics, vol. 6, pp. 1847-1899, 2012.

[2012, article | www]

A. Channarond, J. J. Daudin, and S. Robin, "Classification and estimation in the Stochastic Blockmodel based on the empirical degrees," Electron. J. Statist., vol. 6, pp. 2574-2601, 2012.

[2012, article | www]

N. Commeau, M. Cornu, I. Albert, J.-B. Denis, and E. Parent, "Hierarchical Bayesian Models to Assess Between- and Within-Batch Variability of Pathogen Contamination in Food," Risk Analysis, vol. 32, iss. 3, pp. 395-415, 2012.

[2012, article | www]

N. Commeau, E. Parent, M.-L. Delignette-Muller, and M. Cornu, "Fitting a lognormal distribution to enumeration and absence/presence data," International journal of food microbiology, vol. 155, iss. 3, pp. 146-152, 2012.

[2012, article | www]

F. Cubillos, J. Yansouni, H. Khalili, S. Balzergue, S. Elftieh, M.-L. Martin-Magniette, Y. Serrand, L. Lepiniec, S. Baud, B. Dubreucq, J.-P. Renou, C. Camilleri, and O. Loudet, "Expression variation in connected recombinant populations of Arabidopsis thaliana highlights distinct transcriptome architectures," BMC Genomics, vol. 13, iss. 1, p. 117, 2012.

[2012, article | www]

M. Delattre, R. M. Savic, R. Miller, M. O. Karlsson, and M. Lavielle, "Analysis of exposure-response og CI-945 in patients with epilepsy: application of novel mixed hidden Markov modelling methodology," Journal of Pharmacokinetics and Pharmacodynamics, vol. 39, iss. 3, pp. 263-271, 2012.

[2012, article | www]

M. Delattre and M. Lavielle, "Maximum Likelihood Estimation in Discrete Mixed Hidden Markov Models using the SAEM algorithm," Computational Statistics & Data Analysis, vol. 56, iss. 6, pp. 2073-2085, 2012.

[2012, article | www]

M.-A. Dillies, A. Rau, J. Aubert, C. Hennequet-Antier, M. Jeanmougin, N. Servant, C. Keime, G. Marot, D. Castel, J. Estelle, G. Guernec, B. Jagla, L. Jouneau, D. Laloe, C. Le Gall, B. Schaeffer, S. Le Crom, M. Guedj, and F. Jaffrezic, "A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis," Briefings in Bioinformatics, 2012.

[2012, article | www]

A. Lavigne, L. Bel, E. Parent, and N. Eckert, "A model for spatio-temporal clustering using multinomial probit regression: application to avalanche counts," Environmetrics, vol. 23, iss. 6, p. 522, 2012.

[2012, article | www]

A. Lesdéma, G. Fromentin, J.-J. Daudin, A. Arlotti, S. Vinoy, Tome, and A. Marsset-Baglieri, "Characterization of the Three-Factor Eating Questionnaire scores of a young French cohort," Appetite, 2012.

[2012, article | www]

D. Rengel, S. Arribat, P. Maury, M.-L. Martin-Magniette, T. Hourlier, M. Laporte, D. Varès, S. Carrère, P. Grieu, S. Balzergue, J. Gouzy, P. Vincourt, and N. B. Langlade, "A Gene-Phenotype Network Based on Genetic Variability for Drought Responses Reveals Key Physiological Processes in Controlled and Natural Environments," PLoS ONE, vol. 7, iss. 10, p. 45249, 2012.

[2012, article | www]

E. Marcon, B. Hérault, C. Baraloto, and G. Lang, "The decomposition of Shannon's entropy and a test for beta diversity," Oikos, vol. 121, pp. 516-522, 2012.

[2012, article]

T. Mary-Huard, F. Jaffrezic, and S. Robin, "ExactDAS: An Exact Test Procedure for the Detection of Differential Alternative Splicing in Microarray Experiments," Stat. Appl. Genet. Mol. Biol., vol. 11, iss. 5, 2012.

[2012, article | www]

Moreau M, Azzopardi M, Clément G, Dobrenel T, Marchive C, Renne C, Martin-Magniette ML, Taconnat L, Renou JP, Robaglia C, and M. C., "Mutations in the Arabidopsis Homolog of LST8/G?L, a Partner of the Target of Rapamycin Kinase, Impair Plant Growth, Flowering, and Metabolic Adaptation to Long Days.," The Plant Cell Online, 2012.

[2012, article | www]

A. Pasanisi, M. Keller, and E. Parent, "Estimation of a quantity of interest in uncertainty analysis: Some help from Bayesian decision theory," Reliability Engineering and System Safety, vol. 100, pp. 93-101, 2012.

[2012, article | www]

M. C. Reymond, G. Brunoud, A. Chauvet, J. F. Martínez-Garcia, M.-L. Martin-Magniette, F. Monéger, and C. P. Scutt, "A Light-Regulated Genetic Module Was Recruited to Carpel Development in Arabidopsis following a Structural Change to SPATULA," The Plant Cell Online, 2012.

[2012, article | www]

M. Simon, J.-M. Fromentin, S. Bonhommeau, D. Gaertner, J. Brodziak, and M.-P. Etienne, "Effects of stochasticity in early life history on steepness and population growth rate estimates: an illustration on Atlantic bluefin tuna," Plos ONE, vol. 7, iss. 10, 2012.

[2012, article | www]

S. Volant, M.-L. Martin-Magniette, and S. Robin, "Variational Bayes approach for model aggregation in unsupervised classification with Markovian dependency," Computational Statistics & Data Analysis, 2012.

[2012, article]

I. Albert, S. Donnet, C. Guihenneuc-Jouyaux, L. S. Choy, K. Mengersen, and J. Rousseau, "Combining expert opinions in prior elicitation (with Discussion)," Bayesian analysis, vol. 7, iss. 3, pp. 503-770, 2012.

[2012, article]

M. Dalmasso, J. Aubert, V. Briard-Bion, V. Chuat, S.-M. Deutsch, S. Even, H. Falentin, G. Jan, J. Jardin, M.-B. Maillard, M. Parayre, M. Piot, J. Tanskanen, and A. Thierry, "A temporal -omic study of Propionibacterium freudenreichii CIRM-BIA1T adaptation strategies in conditions mimicking cheese ripening in the cold.," PLoS ONE, vol. 7, iss. 1, p. 29083, 2012.

[2012, article]

M. Dalmasso, J. Aubert, S. Even, H. Falentin, M.-B. Maillard, M. Parayre, V. Loux, J. Tanskanen, and A. Thierry, "Propionibacterium freudenreichii accumulates intracellular glycogen and trehalose in conditions mimicking cheese ripening in the cold.," Applied and Environmental Microbiology, p. i, 2012.

[2012, article | www]

S. Giger-Reverdin, E. Lebarbier, C. Duvaux-Ponter, and M. Desnoyers, "A new segmentation-clustering method to analyse feeding behaviour of ruminants from within-day cumulative intake patterns," Computers and Electronics in Agriculture, vol. 83, pp. 109-116, 2012.

[2012, article]

A. Hébert, M.-P. Forquin-Gomez, A. Roux, J. Aubert, C. Junot, J.-F. Heilier, S. Landaud, P. Bonnarme, and J.-M. Beckerich, "Study of Yarrowia lipolytica reveals new insights into sulfur metabolism in yeasts," Applied and Environmental Microbiology, p. i, 2012.

[, article]

D. Bernardi, C. Cérin, H. Fkaier, M. Jemni, and M. Koskas, "Geometrical Interpretation for Data Partitioning on a Grid Architecture," IEEE Press, vol. ISBN 1-4244-0307-3, pp. 355-356.

[, article]

M. Koskas, "Work Stealing Technique and Scheduling on the Critical Path," Third International Computing of Grid and Pervasive Computing.

[2012, article | www]

S. Li-Thiao-Té, J.-J. Daudin, and S. Robin, "Bayesian model averaging for estimating the number of classes. Applications to the total number of species in metagenomics," J. Applied Statis., 2012.

[2012, article | www]

S. Gazal, J.-J. Daudin, and S. Robin, "Accuracy of variational estimates for random graph mixture models," Journal of Statistical Computation and Simulation, vol. 82, iss. 6, pp. 849-862, 2012.

**2011**

[2011, article]

A. Célisse and T. Mary-Huard, "Exact Cross-Validation for kNN and applications to passive and active learning in classification.," JSFDS, vol. 152, iss. 3, 2011.

[2011, article | www]

M. Keller, A. Pasanisi, and E. Parent, "Réflexions sur l’analyse d’incertitudes dans un contexte industriel : Information disponible et enjeux décisionnels," Journal de la Société Française de Statistique, vol. 152, iss. 4, pp. 60-77, 2011.

[2011, article | www]

A. Dubois, A. Remay, O. Raymond, S. Balzergue, A. Chauvet, M. Maene, Y. Pécrix, S.-H. Yang, J. Jeauffre, T. Thouroude, V. Boltz, M.-L. Martin-Magniette, S. Janczarski, F. Legeai, J.-P. Renou, P. Vergne, M. Le Bris, F. Foucher, and M. Bendahmane, "Genomic Approach to Study Floral Development Genes in <italic>Rosa sp.</italic>," PLoS ONE, vol. 6, iss. 12, p. 28455, 2011.

[2011, article | www]

M. Keller, A. Pasanisi, and E. Parent, "Réflexions sur l'analyse d'incertitudes dans un contexte industriel : informations disponibles et enjeux décisionnels," JSFDS, vol. 152, iss. 4, pp. 60-77, 2011.

[2011, article | www]

M. Simon, J.-M. Fromentin, B. S., G. D., and E. M-P, "Investigating the performances of a bayesian biomass dynamic model with informative priors on Atlantic bluefin tuna," Collective Volume of Scientific Papers, vol. 66, iss. 2, pp. 811-828, 2011.

[2011, article | www]

F. Wurmser, D. Ogereau, T. Mary-Huard, B. Loriod, D. Joly, and C. Montchamp-Moreau, "Population transcriptomics: insights from Drosophila simulans, Drosophila sechellia and their hybrids," Genetica, vol. 139, iss. 4, pp. 465-477, 2011.

[2011, article | www]

S. Brlek, M. Koskas, and X. Provençal, "A linear time and space algorithm for detecting path intersection in $Z^d$," Theoretical Computer Science, vol. 412, iss. 36, pp. 4841-4850, 2011.

[2011, article | www]

C. Lantuéjoul, J.-N. Bacro, and L. Bel, "Storm processes and stochastic geometry," Extremes, vol. 14, iss. 4, pp. 413-428, 2011.

[2011, article | www]

E. Billoir, V. Zuliani, N. Commeau, M. Cornu, and J.-B. Denis, "Probabilistic modeling of the fate of Listeria monocytogenes in diced bacon during the manufacturing process," Risk Analysis, vol. 31, iss. 2, pp. 237-254, 2011.

[2011, article | www]

M. Forquin, A. Hébert, A. Roux, J. Aubert, C. Proux, J. Heilier, S. Landaud, C. Junot, P. Bonnarme, and I. Martin-Verstraete, "Global regulation in response to sulfur availability in the cheese-related bacterium, Brevibacterium aurantiacum," Applied and Environmental Microbiology, vol. doi:10.1128/AEM.01708-10, 2011.

[2011, article | www]

J.-J. Daudin, "A review of statistical models for clustering networks with an application to a PPI network," Journal de la Société Française de Statistique, vol. 152, iss. 2, pp. 111-125, 2011.

[2011, article | www]

M. Abdelkarim, N. Vintonenko, A. Starzec, A. Robles, J. Aubert, M.-L. Martin, S. Mourah, M.-P. Podgorniak, S. Rodrigues-Ferreira, C. Nahmias, P.-O. Couraud, C. Doliger, O. Sainte-Catherine, N. Peyri, L. Chen, J. Mariau, M. Etienne, G.-Y. Perret, M. Crepin, J.-L. Poyet, A.-M. Khatib, and M. Di Benedetto, "Invading Basement Membrane Matrix Is Sufficient for MDA-MB-231 Breast Cancer Cells to Develop a Stable <italic>In Vivo</italic> Metastatic Phenotype," PLoS ONE, vol. 6, iss. 8, p. 23334, 2011.

[2011, article | www]

C. Bérard, M. L. Martin-Magniette, V. Brunaud, S. Aubourg, and S. Robin, "Unsupervised Classification for Tiling Arrays: ChIP-chip and Transcriptome.," Statistical Applications in Genetics and Molecular Biology, vol. 10:1, iss. 50, 2011.

[2011, article | www]

A. M. B. Moghaddam, F. Roudier, M. Seifert, C. Bérard, M. L. Martin-Magniette, R. K. Ashtiyani, A. Houben, V. Colot, and M. F. Mette, "Additive inheritance of histone modifications in Arabidopsis thaliana intra-specific hybrids," The Plant Journal, 2011.

[2011, article | www]

L. Bel, A. Bar-Hen, R. Petit, and R. Cheddadi, "Spatio-temporal Functional Regression on Paleo-ecological Data," Journal of Applied Statistics, vol. 38, iss. 4, pp. 695-704, 2011.

[2011, article | www]

G. Celeux, M.-L. Martin-Magniette, C. Maugis, and A. E. Raftery, "Witten, D. M., and Tibshirani, R. (2010), ``A Framework for Feature Selection in Clustering, Journal of the American Statistical Association, 105,713-726.," JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, vol. 106, iss. 493, p. 383, 2011.

[2011, article | www]

G. Chaouat, N. Rodde, M. Petitbarat, R. Bulla, M. Rahmati, S. Dubanchet, S. Zourbas, I. Bataillon, N. Coqué, B. Hennuy, J. Martal, C. Munaut, J. Aubert, V. Sérazin, T. Steffen, J. Jensenius, J. Foidart, O. Sandra, F. Tedesco, and N. Lédée, "An insight into normal and pathological pregnancies using large-scale microarrays: lessons from microarrays," Journal of Reproductive Immunology, vol. 89, iss. 2, pp. 163-72, 2011.

[2011, article | www]

P. Faivre Rampant, I. Lesur, C. Boussardon, F. Bitton, M.-L. Martin-Magniette, C. Bodenes, G. Le Provost, H. Berges, S. Fluch, A. Kremer, and C. Plomion, "Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome," BMC Genomics, vol. 12, iss. 1, p. 292, 2011.

[2011, article | www]

C. Maugis, G. Celeux, and M.-L. Martin-Magniette, "Variable selection in model-based discriminant analysis," Journal of Multivariate Analysis, 2011.

[2011, article | pdf]

N. Lédée, C. Munaut, J. Aubert, V. Sérazin, M. Rahmati, G. Chaouat, O. Sandra, and J.-M. Foidart, "Specific and extensive endometrial deregulation is present before conception in IVF/ICSI repeated implantation failures (IF) or recurrent miscarriages," The Journal of Pathology, 2011.

[2011, article | pdf]

A. Hébert, M.-P. Forquin-Gomez, A. Roux, J. Aubert, C. Junot, V. Loux, J.-F. Heilier, P. Bonnarme, J.-M. Beckerich, and S. Landaud, "Exploration of sulfur metabolism in the yeast Kluyveromyces lactis," Applied Microbiology and Biotechnology, vol. 91, pp. 1409-1423, 2011.

[2011, article]

I. Albert, E. Espié, H. de Valk, and J.-B. Denis, "A Bayesian evidence synthesis for estimating campylobacteriosis prevalence," Risk Analysis, vol. 31, iss. 7, pp. 1141-1155, 2011.

[2011, article | www]

F. Roudier, I. Ahmed, C. Bérard, A. Sarazin, T. Mary-Huard, and al., "Integrative epigenomic mapping defines four main chromatin states in Arabidopsis," The EMBO Journal, vol. 30, pp. 1928-1938, 2011.

[2011, article | www]

V. T. Stefanov, S. Robin, and S. Schbath, "Occurrence of structured motifs in random sequences: Arbitrary number of boxes," Discr. Appli. Math, vol. 159, iss. 8, pp. 826-831, 2011.

[2011, article | www]

R. Rigaill, E. Lebarbier, and S. Robin, "Exact posterior distributions and model selection criteria for multiple change-point detection problems," Stat. comput., pp. 1-13, 2011.

[2011, article | www]

F. Picard, E. Lebarbier, M. Hoebecke, G. Rigaill, B. Thiam, and S. Robin, "Joint segmentation, calling and normalization of multiple CGH profiles," Biostatistics, vol. 412, iss. 43, pp. 4413-428, 2011.

[2011, article | www]

F. Picard, E. Lebarbier, E. Budinska, and S. Robin, "Joint segmentation of multivariate Gaussian processes using mixed linear models," CSDA, vol. 55, iss. 2, pp. 1160-70, 2011.

[2011, article | www]

M. Braccini, M. Etienne, and S. Martell, "Subjective judgement in data subsetting: implications for CPUE standardisation and stock assessment of non-target chondrichthyans," Marine and Freshwater Research, vol. 62, 2011.

A. Crépet and J. Tressou, "Bayesian nonparametric model for clustering individual co-exposure to pesticides found in the French diet," Bayesian Analysis, vol. 6, iss. 1, pp. 127-144, 2011.

**2010**

[2010, article | www]

M. Delattre, "Inference in Mixed Hidden Markov Models and Applications to Medical Studies," Journal de la Société Française de Statistique, vol. 151, iss. 1, pp. 90-105, 2010.

[2010, article | www]

M. Mariadassou, S. Robin, and C. Vacher, "Uncovering structure in valued graphs: a variational approach," Ann. Appl. Statist., vol. 4, iss. 2, pp. 715-42, 2010.

[2010, article | www]

A. Célisse and S. Robin, "A cross-validation based estimation of the proportion of true null hypotheses," JSPI, vol. 140, pp. 3132-47, 2010.

[2010, article | www]

N. Eckert, M. Naim, and E. Parent, "Long-term avalanche hazard assessment with a Bayesian depth-averaged propagation model," Journal of Glaciology, vol. 56, iss. 198, pp. 563-586, 2010.

[2010, article | www]

N. Eckert, E. Parent, R. Kies, and H. Baya, "A spatio-temporal modelling framework for assessing the fluctuations of avalanche occurrence resulting from climate change: application to 60 years of data in the northern French Alps," Climatic Change, vol. 101, pp. 515-553, 2010.

[2010, article | www]

N. Eckert, E. Parent, M. Naim, and D. Richard, "Prédétermination et calcul de risque dans le cas des avalanches : avantages et limites des méthodes utilisées en ingénierie et perspectives d'avenir," Sciences, Eaux et Territoires. Numéro spécial Risques naturels en montagne : Nouveaux outils, nouvelles connaissances et nouveaux savoir-faire, vol. 2, pp. 26-35, 2010.

[2010, article | www]

J. Piffady, Y. Souchon, H. Capra, and E. Parent, "Quantifying the effects of temperature and flow regime on the abundance of 0+ cyprinids in the upper River Rhone using Bayesian hierarchical modelling," Stoch. Environ. Res Ris. Assess., 2010.

[2010, article | www]

A. Spor, C. Dillmann, S. Wang, D. de Vienne, D. Sicard, and E. Parent, "Hierarchical Bayesian Modelling for Saccharomyces cerevisiae population dynamics," International Journal of Food Microbiology, vol. 142, iss. 1-2, pp. 25-35, 2010.

[2010, article | www]

V. Andreassian, C. Perrin, E. Parent, and A. Bardossy, "The Court of Miracles of Hydrology: can failure stories contribute to hydrological science?," Hydrological Sciences Journal-Journal des Sciences Hydrologiques, vol. 55, iss. 6, pp. 849-856, 2010.

[2010, article | www]

P. Chagneau, F. Mortier, N. Picard, and J.-N. Bacro, "Hierarchical Bayesian model for spatial prediction of multivariate non-Gaussian random fields," Accepté dans Biometrics, 2010.

[2010, article | www]

J. J. Daudin, L. Pierre, and C. Vacher, "Model for Heterogeneous Random Networks Using Continuous Latent Variables and an Application to a Tree–Fungus Network," Biometrics, vol. 66, pp. 1043-1051, 2010.

[2010, article | www]

C. Vacher, J. J. Daudin, D. Piou, and M. L. Desprez-Loustau, "Ecological integration of alien species into a tree-parasitic fungus network," Biological Invasions, vol. 12, iss. 9, pp. 3249-3259, 2010.

[2010, article | www]

D. Balin-Talamba, E. Parent, and A. Musy, "Bayesian multiresponse calibration of TOPMODEL: Application to the Haute-Mentue catchment, Switzerland," Water Resources Research, vol. 46, iss. W08524, p. 6, 2010.

[2010, article | www]

S. Ancelet, M.-P. Etienne, H. Benoit, and E. Parent, "Modelling spatial zero-inflated continuous data with an exponentially compound Poisson process," Environmental and Ecological Statistics, vol. 17, iss. 3, pp. 347-376, 2010.

[2010, article | www]

J.-N. Bacro, L. Bel, and C. Lantuéjoul, "Testing the independence of maxima: from bivariate vectors to spatial extreme fields," Extremes, vol. 13, p. 155, 2010.

[2010, article | www]

D. Cohen, M.-B. Bogeat-Triboulot, E. Tisserant, S. Balzergue, M.-L. Martin-Magniette, G. Lelandais, N. Ningre, J.-P. Renou, J.-P. Tamby, D. Le Thiec, and I. Hummel, "Comparative transcriptomics of drought responses in Populus: a meta-analysis of genome-wide expression profiling in mature leaves and root apices across two genotypes," BMC Genomics, vol. 11, p. 630, 2010.

[2010, article | www]

S. Chadi, R. Young, S. Le Guillou, G. Tilly, F. Bitton, M.-L. Martin-Magniette, L. Soubigou-Taconnat, S. Balzergue, M. Vilotte, C. Peyre, B. Passet, V. Beringue, J.-P. Renou, F. Le Provost, H. Laude, and J.-L. Vilotte, "Brain transcriptional stability upon prion protein-encoding gene invalidation in zygotic or adult mouse," BMC Genomics, vol. 11, iss. 1, p. 448, 2010.

[2010, article]

I. Albert, G. Villeret, A. Paris, and P. Verger, "Integration of half-life and dietary intake variability to predict mercury concentration in hair," Regulatory Toxicology and Pharmocology, vol. 58, pp. 482-489, 2010.

P. Doukhan, O. Klesov, and G. Lang, "Rates in strong laws of large numbers in nonparametric statistics," Acta Scientiarum Matematicarum, vol. 76, pp. 683-695, 2010.

P. Bertail, S. Clémençon, and J. Tressou, "Statistical Analysis of a Dynamic Model for Food Contaminant Exposure with Applications to Dietary Methylmercury Contamination," Journal of Biological Dynamics, vol. 4, iss. 2, pp. 212-234, 2010.

**2009**

[2009, article]

C. Durot, E. Lebarbier, and A. S. Tocquet, "Estimating the joint distribution of independent categorical variables via model selection," Bernouilli, vol. 15, iss. 2, pp. 475-507, 2009.

[2009, article | www]

N. Eckert, E. Parent, M. Naim, and D. Richard, "Bayesian optimal design of an avalanche dam using a multivariate numerical avalanche model," Stoch. Environ. Res Ris. Assess., vol. 23, iss. 2, pp. 1123-1141, 2009.

[2009, article | www]

L. Bel, D. Allard, J. M. Laurent, R. Cheddadi, and A. Bar-Hen, "CART algorithm for spatial data : Application to environmental and ecological data," Computational Statistics & Data Analysis, vol. 53, pp. 3082-3093, 2009.

[2009, article | www]

P. Chagneau, F. Mortier, and N. Picard, "Designing permanent sample plots using a spatially hierarchical matrix population model," Journal of the Royal Statistical Society, Serie C., vol. 58, iss. 3, pp. 345-367, 2009.

P. Doukhan and G. Lang, "Evaluation for moments of a ratio with application to regression estimation," Bernoulli, vol. 15, iss. 4, pp. 1259-1286, 2009.

P. Doukhan, J.-D. Fermanian, and G. Lang, "Empirical process of a vector-valued stationary weakly dependent process," Stat. Inf. Stoc. Pro, vol. 12, iss. 1, pp. 65-87, 2009.

[2009, article | www]

N. Mansouri-Attia, J. Aubert, P. Teinaud, C. Giraud-Delville, G. Tagouhti, L. Galio, R. E. Everts, S. Degrelle, C. Richard, I. Hue, X. Yang, C. Tian, H. A. Lewin, J.-P. Renard, and O. Sandra, "Gene expression profiles of bovine caruncular and intercaruncular endometrium at implantation," Physiological Genomics, vol. 39, pp. 14-27, 2009.

[2009, article | www]

F. Faucon, E. Rebours, C. Bevilacqua, J.-C. Helbling, J. Aubert, S. Makhzami, S. Dhorne-Pollet, S. Robin, and P. Martin, "Terminal differentiation of goat mammary tissue during pregnancy requires the expression of genes involved in immune functions," Physiological Genomics, vol. 40, pp. 61-82, 2009.

[2009, article | www]

N. Lédée, J. Aubert, B. Hennuy, C. Munaut, V. Sérazin, S. Petitbarat, S. Dubanchet, G. Chaouat, and O. Sandra, "The preconceptional endometrial environment affects both implantation and gestation in human," Journal of Reproductive Immunology, p. 119, 2009.

[2009, article | www]

S. Elis, E. Blesbois, I. Couty, S. Balzergue, M.-L. Martin-Magniette, and F. Batellier, "Identification of germinal disk region derived genes potentially involved in hen fertility," Mol. Reprod. Dev., vol. 76, iss. 11, pp. 1043-1055, 2009.

[2009, article | www]

N. Férey, G. Bouyer, C. Martin, A. Drif, P. Bourdot, M. Ammi, J. Nelson, J.-M. Burkhardt, and A. L., "Docking de protéines en réalité virtuelle Une approche hybride et multimodale," Technique et Science Informatiques, vol. 28, iss. 8, pp. 983-1015, 2009.

[2009, article | www]

N. Férey, J. Nelson, C. Martin, L. Picinali, G. Bouyer, A. Tek, P. Bourdot, J.-M. Burkhardt, B. F. G. Katz, M. Ammi, C. Etchebest, and L. Autin, "Multisensory VR interaction for protein-docking in the CoRSAIRe project," Virtual Reality, vol. 13, iss. 4, pp. 273-293, 2009.

[2009, article | www]

S. Groc, J. Orivel, A. Dejean, M. Jean-Michel, M.-P. Etienne, B. Corbara, and J. H. C. Delabie, "Baseline study of the leaf-litter ant fauna in French Guianese forest," Insect Conservation and Diversity, vol. 2, p. 183, 2009.

[2009, article | www]

M. Guedj, S. Robin, A. Celisse, and G. Nuel, "Kerfdr: A semi-parametric kernel-based approach to local FDR estimation," BMC Bioinformatics, vol. 10, iss. 84, 2009.

[2009, article | www]

N. Mansouri-Attia, O. Sandra, J. Aubert, S. Degrelle, R. E. Everts, C. Giraud-Delville, Y. Heyman, L. Galio, I. Hue, X. Yang, C. X. Tian, H. A. Lewin, and J.-P. and Renard, "Endometrium as an early sensor of in vitro embryo manipulation technologies," PNAS, 2009.

[2009, article | www]

M.-L. Martin-Magniette and M.-L. Taupin, "Semi-parametric estimation of the hazard function in a model with covariate measurement error.," ESAIM Probability and Statistics, vol. 13, pp. 87-114, 2009.

[2009, article | www]

T. Mary-Huard and S. Robin, "Tailored Aggregation for Classification," IEEE Trans. Pattern Anal. and Machine Intel., vol. 31, iss. 8, 2009.

[2009, article | www]

C. Maugis, G. Celeux, and M.-L. Martin-Magniette, "Variable Selection for Clustering with Gaussian Mixture Models," Biometrics, vol. 65, pp. 701-709, 2009.

[2009, article | www]

C. Maugis, G. Celeux, and L. M. Martin-Magniette, "Variable selection in model-based clustering: A general variable role modeling," Comput. Stat. Data Anal., vol. 53, iss. 11, pp. 3872-3882, 2009.

[2009, article | www]

P. Nicolas, A. Leduc, S. Robin, S. Rasmussen, H. Jarmer, and P. Bessieres, "Transcriptional landscape estimation from tiling array data using a model of signal shift and drift," Bioinformatics, vol. 25, pp. 2341-2347, 2009.

[2009, article | www]

F. Picard, V. Miele, J.-J. Daudin, L. Cottret, and S. Robin, "Deciphering the connectivity structure of biological networks using MixNet," BMC Bioinformatics, vol. Suppl 6, p. 17, 2009.

[2009, article | www]

N. Picard, P. Chagneau, F. Mortier, and A. Bar-Hen, "Finding confidence limits on population growth rates : Boostrap and analytic methods.," Mathematical Biosciences, vol. 219, iss. 1, pp. 23-31, 2009.

[2009, article | www]

S. Robin and V. T. Stefanov, "Simultaneous Occurrences of Runs in Independent Markov Chains," Methodology and Computing in Applied Probability, vol. 11, iss. 2, pp. 267-275, 2009.

[2009, article | www]

V. H. Teixeira, R. Olaso, M.-L. Martin-Magniette, S. Lasbleiz, L. Jacq, C. R. Oliveira, P. Hilliquin, I. Gut, F. Cornelis, and E. Petit-Teixeira, "Transcriptome Analysis Describing New Immunity and Defense Genes in Peripheral Blood Mononuclear Cells of Rheumatoid Arthritis Patients," PLoS ONE, vol. 4, iss. 8, p. 6803, 2009.

[2009, article]

S. Brlek, M. Koskas, and X. Provençal, "A linear time and space algorithm for detecting path intersection," DGI 2009, 2009.

O. Allais and J. Tressou, "Using decomposed household food acquisitions as inputs of a Kinetic Dietary Exposure Model," Statistical Modelling: an International Journal, vol. 9, iss. 1, pp. 27-50, 2009.

A. Crépet, H. Harari-Kermadec, and J. Tressou, "Using empirical likelihood to combine data: application to food risk assessment," Biometrics, vol. 65, iss. 1, pp. 257-266, 2009.

[2009, article | pdf]

S. Clémençon and J. Tressou, "Exposition aux risques alimentaires et processus stochastiques : le cas des contaminants chimiques," Journal de la SFDS, vol. 150, iss. 1, pp. 3-29, 2009.

P. Bertail, S. Clémençon, and J. Tressou, "Extreme values statistics for \uppercaseMarkov chains via the (pseudo-) regenerative method.," Extremes, vol. 12, iss. 4, pp. 327-360, 2009.

**2008**

[2008, article | www]

N. Eckert, E. Parent, M. Naim, and D. Richard, "Bayesian stochastic modelling for avalanche predetermination: from a general system framework to return period computations," Stoch. Environ. Res Ris. Assess., vol. 22, iss. 2, pp. 185-206,doi 10.1007/s00477, 2008.

[2008, article | www]

E. Parent, B. Amzal, and P. Girard, "Investigations particulaires pour l'inférence statistique et l'optimisation de plan d'expériences," Journal de la Sfds, vol. 149, iss. 1, 2008.

[2008, article | www]

E. Rivot, E. Prevost, C. A., J.-L. Bagliniere, and E. Parent, "Hierarchical Bayesian modelling with habitat and time covariates for estimating riverine fish population size by successive removal method," Can. J. Fish. Aquat. Sci., vol. 65, pp. 117-133, 2008.

[2008, article | www]

N. Eckert, E. Parent, T. Faug, and M. Naaim, "Optimal Design under Uncertainty of a Passive Defense Structure Against Snow Avalanches: From a General Bayesian Framework to a Simple Analytical Model," Natural Hazards and Earth System Sciences, vol. 8, iss. 1, pp. 1067-1081, 2008.

[2008, article]

A. Cornuéjols and M. Sebag, "A note on phase transition and computational pitfalls of learning from sequences," International Journal of Intelligent Information Systems (JIIS), vol. 31, iss. 2, pp. 177-189, 2008.

[2008, article | www]

N. Picard, F. Mortier, and P. Chagneau, "Influence of estimators of the vital rates in the stock recovery rate when using matrix models for tropical rainforests," Ecological Modelling, vol. 214, iss. 2-4, pp. 349-360, 2008.

[2008, article | www]

M. Benhamed, M. Martin-Magniette, L. Taconnat, F. Bitton, C. Servet, R. De Clercq, B. De Meyer, C. Buysschaert, S. Rombauts, R. Villarroel-Mandiola, S. Aubourg, J. Beynon, R. Bhalerao, G. Coupland, W. Gruissem, F. Menke, B. Weisshaar, J. Renou, D. Zhou, and P. Hilson, "Genome-scale Arabidopsis promoter array identifies targets of the histone acetyltransferase GCN5.," PLANT JOURNAL, vol. 56, iss. 3, pp. 493-504, 2008.

[2008, article | www]

S. Gagnot, J.-P. Tamby, M.-L. Martin-Magniette, F. Bitton, L. Taconnat, S. Balzergue, S. Aubourg, J.-P. Renou, L. Alain, and B. Véronique, "CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform," Nucleic Acids Research, vol. 36, p. d986-d990, 2008.

[2008, article | www]

S. Ruffel, S. Freixes, S. Balzergue, P. Tillard, C. Jeudy, M.-L. Martin-Magniette, M. J. van der Merwe, K. Kakar, J. Gouzy, A. R. Fernie, M. Udvardi, C. Salon, A. Gojon, and M. Lepetit, "Systemic Signaling of the Plant Nitrogen Status Triggers Specific Transcriptome Responses Depending on the Nitrogen Source in Medicago truncatula," Plant Physiol., vol. 146, iss. 4, pp. 2020-2035, 2008.

[2008, article | www]

M. Cossegal, P. Chambrier, S. Mbelo, S. Balzergue, M.-L. Martin-Magniette, A. Moing, C. Deborde, V. Guyon, P. Perez, and P. Rogowsky, "Transcriptional and Metabolic Adjustments in ADP-Glucose Pyrophosphorylase-Deficient bt2 Maize Kernels," Plant Physiol., vol. 146, iss. 4, pp. 1553-1570, 2008.

[2008, article | www]

M. Navajas, A. Migeon, C. Alaux, M. Martin-Magniette, G. Robinson, J. Evans, S. Cros-Arteil, D. Crauser, and Y. Le Conte, "Differential gene expression of the honey bee Apis mellifera associated with Varroa destructor infection," BMC Genomics, vol. 9, iss. 1, p. 301, 2008.

[2008, article | www]

S. Elis, F. Batellier, I. Couty, S. Balzergue, M.-L. Martin-Magniette, P. Monget, E. Blesbois, and M. Govoroun, "Search for the genes involved in oocyte maturation and early embryo development in the hen," BMC Genomics, vol. 9, iss. 1, p. 110, 2008.

[2008, article | www]

L. Bel, J.-N. Bacro, and C. Lantuéjoul, "Assessing extremal dependence of environmental spatial fields," Environmetrics, vol. 19, pp. 163-182, 2008.

[2008, article | www]

J.-M. Laurent, L. François, A. Bar-Hen, L. Bel, and R. Cheddadi, "European Bioclimatic Affinity Groups: Data-model comparisons," Global and Planetary Change, vol. 61, pp. 28-40, 2008.

[2008, article | www]

F. Picard, J.-J. Daudin, M. Koskas, S. Schbath, and S. Robin, "Assessing the exceptionality of network motifs," JCB, vol. 15, iss. 1, pp. 1-20, 2008.

[2008, article | www]

D. Sauvant, P. Schmidely, J.-J. Daudin, and N. St-Pierre, "Meta-analyses of experimental data in animal nutrition," ANIMAL, vol. 8, iss. 2, pp. 1203-1214, 2008.

[2008, article | www]

M.-L. Martin-Magniette, J. Aubert, A. Bar-Hen, S. Elftieh, F. Magniette, J.-P. Renou, and J.-J. Daudin, "Normalization for triple-target microarray experiments," BMC BIOINFORMATICS, vol. 9, iss. 216, 2008.

[2008, article | www]

S. Degrelle, C. Hennequet-Antier, H. Chiapello, K. Piot-Kaminski, F. Piumi, S. Robin, J.-P. Renard, and H. I., "Amplification biases: possible differences among deviating gene expressions," BMC Genomics, vol. 9, iss. 1, p. 46, 2008.

[2008, article | www]

J.-J. Daudin, F. Picard, and S. Robin, "A mixture model for random graphs," Stat. Comput., vol. 18, iss. 2, pp. 173-83, 2008.

[2008, article]

R. Mercier, M.-A. Petit, S. Schbath, S. Robin, M. El Karoui, F. Boccard, and O. Espéli, "The MatP/matS site specific system organizes the Terminus region of the E. coli chromosome into a Macrodomain," Cell, vol. 135, pp. 475-85, 2008.

[2008, article | www]

J.-J. Daudin and T. Mary-Huard, "Estimation of the conditional risk in classification: The swapping method," "Comp. Stat. and Data Anal.", vol. 52, p. 3220–-3232, 2008.

[2008, article | www]

T. Mary-Huard, J. Aubert, N. Mansouri-Attia, O. Sandra, and J.-J. Daudin, "Statistical methodology for the analysis of dye-switch microarray experiments," BMC Bioinformatics, vol. 9, iss. 98, 2008.

[2008, article | www]

M.-L. Martin-Magniette, T. Mary-Huard, C. Bérard, and S. Robin, "ChIPmix: Mixture model of regressions for two-color ChIP-chip analysis," Bioinformatics, vol. 24, pp. 181-86, 2008.

[2008, article | www]

L. Flori, C. Rogel-Gaillard, M. Cochet, G. Lemonnier, K. Hugot, P. Chardon, and F. Robin S. Lefevre, "Transcriptomic analysis of the dialogue between Pseudorabies virus and porcine epithelial cells during infection," BMC Genomics, vol. 9, p. 123, 2008.

[2008, article]

K. Lehongre, T. Aubin, S. Robin, and C. Del Negro, "Individual signature in canary songs: contribution of multiple levels of song structure," Ethology, vol. 114, pp. 425-35, 2008.

[2008, article]

R. Cheddadi and A. Bar-Hen, "Spatial gradient of temperature and potential vegetation feedback across Europe during the late Quaternary," Climate Dynamics, 2008.

[2008, article]

N. Picard, A. Bar-Hen, F. Mortier, and J. Chadoeuf, "The Multi-scale Marked Area-interaction Point Process: A Model for the Spatial Pattern of Trees," Scandinavian Journal of Statistics, 2008.

[2008, article]

I. Albert, E. Grenier, J.-B. Denis, and J. Rousseau, "Quantitative Risk Assessment from Farm to Fork and Beyond: a global Bayesian Approach concerning food-borne diseases," Risk Analysis, vol. 28, iss. 2, pp. 557-571, 2008.

[2008, article]

J. Lamy, C. Duclos, A. Bar-Hen, P. Ouvrard, and A. Venot, "An iconic language for the graphical representation of medical concepts," BMC Med. Inform. Decis. Mak., vol. 8, iss. 1, p. 16, 2008.

[2008, article]

A. Bar-Hen, M. Mariadassou, M. Poursat, and P. Vandenkoornhuyse, "Influence Function for Robust Phylogenetic Reconstructions," Molecular Biology and Evolution, vol. 25, iss. 5, pp. 869-873, 2008.

[2008, article | pdf]

P. Bertail, S. Clémençon, and J. Tressou, "A storage model for modelling exposure to food contaminants.," Mathematical Biosciences and Engineering, vol. 5, iss. 1, pp. 35-60, 2008.

J. Tressou, "Bayesian Nonparametrics for Heavy Tailed Distribution. Application to Food Risk Assessment," Bayesian Analysis, vol. 3, iss. 2, pp. 367-392, 2008.

[2008, article]

A. L. Afchain, F.Carlin, C. Nguyen-the, and I. Albert, "Improving quantitative exposure assessment by considering genetic diversity of B. cereus in cooked, pasteurised and chilled foods," International Journal of Food Microbiology, vol. 128, pp. 165-173, 2008.

[2008, article | www]

A. Celisse and S. Robin, "Nonparametric density estimation by exact leave-p-out cross-validation," Computational Statistics and Data Analysis., vol. 52, iss. 5, pp. 2350-2368, 2008.

P. Doukhan, G. Lang, S. Louhichi, and B. Ycart, "A functional central limit theorem for interacting particle systems on transitive graphs," Markov Processes Relat. Fields, vol. 14, pp. 79-114, 2008.

[2008, article | www]

J.-M. Bardet, P. Doukhan, G. Lang, and N. Ragache, "Dependent Lindeberg central limit theorem and some applications," ESAIM-PS, vol. 12, pp. 154-172, 2008.

**2007**

[2007, article]

Y. Guédon, Y. Caraglio, P. Heuret, E. Lebarbier, and C. Meredieu, "Analyzing growth components in trees," Journal of Theoretical Biology, vol. 248, iss. 3, pp. 418-447, 2007.

[2007, article | www]

N. Eckert, E. Parent, and D. Richard, "Revisiting statistical-topographical methods for avalanche predetermination: Bayesian modelling for runout distance predictive distribution," Cold Reg. Sci. Technol, vol. 49, iss. 1, pp. 88-107, 2007.

[2007, article | www]

A. Bar-hen and E. Parent, "Biodiversité et approches spatiales en environnement : introduction," Journal de la Sfds et Revue de Statistique Appliquée, vol. 1, pp. 5-8, 2007.

[2007, article | www]

T. Mary-Huard, J.-J. Daudin, M. Baccini, A. Biggeri, and A. Bar-Hen, "Biases induced by pooling samples in microarray experiments," Bioinformatics, vol. 23, iss. 13, 2007.

[2007, article]

T. Mary-Huard, S. Robin, and J.-J. Daudin, "A penalized criterion for variable selection in classification," J. Mult. Anal., vol. 98, iss. 4, pp. 695-705, 2007.

[2007, article | www]

S. Robin, S. Schbath, and V. Vandewalle, "Statistical tests to compare motif count exceptionalities," BMCB, vol. 8, iss. 84, pp. 1-12, 2007.

[2007, article | www]

M. Bourdat-Deschamps, J.-J. Daudin, and E. Barriuso, "An experimental design approach to optimise the determination of polycyclic aromatic hydrocarbons from rainfall water using stir bar sorptive extraction and high performance liquid chromatography-fluorescence detection," JOURNAL OF CHROMATOGRAPHY A, vol. 1167, iss. 2, pp. 143-153, 2007.

[2007, article | www]

S. Robin, A. Bar-Hen, J.-J. Daudin, and L. Pierre, "A semi-parametric approach for mixture models: Application to local False Discovery Rate estimation," CSDA, vol. 51, iss. 12, pp. 5483-93, 2007.

[2007, article]

V. Stefanov, S. Robin, and S. Schbath, "Waiting times for clumps of patterns and for structured motifs in random sequences," Discrete Appl. Math., vol. 155, pp. 868-80, 2007.

[2007, article | www]

P. Doukhan, G. Lang, and D. Surgailis, "Randomly fractionally integrated processes," Liet. matem. Rink., vol. 47, iss. 1, pp. 1-25, 2007.

[2007, article | www]

F. Picard, S. Robin, E. Lebarbier, and J.-J. Daudin, "A Segmentation/Clustering Model for the Analysis of Array CGH Data," Biometrics, vol. 63, iss. 3, pp. 758-66, 2007.

[2007, article | www]

D. Halpern, H. Chiapello, S. Schbath, S. Robin, C. Hennequet-Antier, A. Gruss, and M. El Karoui, "Identification of DNA Motifs Implicated in Maintenance of Bacterial Core Genomes by Predictive Modeling," PLoS Genetics SP, vol. 3, iss. 9, p. 153, 2007.

[2007, article | www]

F. Turck, F. Roudier, S. Farrona, M.-L. Martin-Magniette, E. Guillaume, N. Buisine, S. Gagnot, R. A. Martienssen, G. Coupland, and V. Colot, "Arabidopsis TFL2/LHP1 Specifically Associates with Genes Marked by Trimethylation of Histone H3 Lysine 27," PLoS Genet, vol. 3, iss. 6, p. 86, 2007.

[2007, article | www]

F. Ramel, C. Sulmon, F. Cabello-Hurtado, L. Taconnat, M.-L. Martin-Magniette, J.-P. Renou, A. El Amrani, I. Couee, and G. Gouesbet, "Genome-wide interacting effects of sucrose and herbicide-mediated stress in Arabidopsis thaliana: novel insights into atrazine toxicity and sucrose-induced tolerance," BMC Genomics, vol. 8, iss. 1, p. 450, 2007.

[2007, article]

A. Crépet, I. Albert, C. Dervin, and F. Carlin, "Estimation of microbial contamination in food from prevalence and concentration data. Application to Listeria monocytogenes in fresh vegetables," AEM, vol. 73, iss. 1, pp. 250-258, 2007.

[2007, article | www]

S. Aubourg, M.-L. Martin-Magniette, V. Brunaud, L. Taconnat, F. Bitton, S. Balzergue, P. Jullien, M. Ingouff, V. Thareau, T. Schiex, A. Lecharny, and J.-P. Renou, "Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome," BMC Genomics, vol. 8, iss. 1, p. 401, 2007.

[2007, article | www]

I. Frey, I. Rubio-Aliaga, A. Siewert, D. Sailer, A. Drobyshev, J. Beckers, M. Hrabe de Angelis, J. Aubert, A. Bar-Hen, O. Fiehn, H. Eichinger, and H. Daniel, "Profiling at mRNA, protein and metabolite level reveals alterations in renal amino acid handling and glutathione metabolism in kidney tissue of Pept2± mice," Physiological Genomics, vol. 28, iss. 3, pp. 301-310, 2007.

[2007, article | pdf]

E. Aït Yahya-Graison, J. Aubert, L. Dauphinot, I. Rivals, M. Prieur, G. Golfier, J. Rossier, L. Personnaz, N. Créau, S. Robin, J. Delabar, and M.-C. Potier, "Classification of variations of HSA21 gene expression in Down syndrome lymphoblastoid cell lines: impact on disease phenotype," Amer. J. Human Genet., vol. 81, iss. 3, pp. 475-491, 2007.

P. Verger, J. Tressou, and S. Clémençon, "Integration of time as a description parameter in risk characterisation: application to methylmercury," Regulatory Toxicology and Pharmacology, vol. 49, iss. 1, pp. 25-30, 2007.

**2006**

[2006, article | www]

B. Amzal, F. Bois, E. Parent, and C. P. Robert, "Bayesian Optimal Design Via Interacting Particle Systems," J. Am. Stat. Ass., vol. 101, iss. 474, pp. 773-785, 2006.

[2006, article | www]

N. Eckert, E. Parent, and B. L., "Hierarchical modelling for spatial analysis of avalanche frequency at the scale of the township," Cold Reg. Sci. Technol., 2006.

[2006, article | www]

E. Parent, J. Bernier, and J.-J. Boreux, "Le r\^0le pivot des variables latentes pour le raisonnement statistique conditionnel. Exemples d'applications environnementales des processus ponctuels marqués," Revue de Statistique Appliquée, vol. LIV, iss. 4, pp. 85-112, 2006.

[2006, article | www]

N. Eckert, E. Parent, and D. Richard, "Une méthode statistique-topographique de prédétermination des distances d'arrêt des avalanches," La Houille Blanche, vol. 2, pp. 120-127, 2006.

[2006, article | www]

E. Lebarbier and T. Mary-Huard, "Une introduction au critère BIC : fondements théoriques et interprétation," Journal de la SFdS, vol. 147, iss. 1, pp. 39-57, 2006.

[2006, article | www]

S. Herbette, L. Taconnat, V. Hugouvieux, M.-L. Martin-Magniette, S. Cuine, P. Auroy, P. Richaud, C. Forestier, J. Bourguignon, J.-P. Renou, A. Vavasseur, and N. Leonhart, "Genome-wide transcriptome profiling of the early cadmium response of Arabidopsis roots and shoots.," Biochimie, vol. 11, pp. 1751-1765, 2006.

[2006, article | www]

C. Matias, S. Schbath, E. Birmelé, J. J. Daudin, and S. Robin, "Network motifs : mean and variance for the count," REVSTAT, vol. 4, iss. 1, pp. 31-51, 2006.

[2006, article | www]

F. Aziza, E. Mettler, J.-J. Daudin, and M. Sanaa, "Stochastic, compartmental, and dynamic modeling of cross-contamination during mechanical smearing of cheeses," RISK ANALYSIS, vol. 26, iss. 3, pp. 731-745, 2006.

[2006, article | www]

P. Rouillier, S. Bertrais, J.-J. Daudin, J.-N. Bacro, S. Hercberg, and M.-C. Boutron-Ruault, "Drinking patterns are associated with variations in atherosclerotic risk factors in French men," EUROPEAN JOURNAL OF NUTRITION, vol. 45, iss. 2, pp. 79-87, 2006.

P. Bertail and J. Tressou, "Incomplete generalized U-Statistics for food risk assessment," Biometrics, vol. 62, iss. 1, pp. 66-74, 2006.

E. D. Caldas, J. Tressou, and P. E. Boon, "Probabilistic assessment of the cumulative acute exposure to organophosphorus and carbamate insecticides in the Brazilian diet," Toxicology, vol. 222, iss. 1-2, pp. 132-142, 2006.

E. D. Caldas, J. Tressou, and P. E. Boon, "Dietary exposure of Brazilian consumers to the dithiocarbamate pesticides – a probabilistic approach," Food Chemical and Toxicology, vol. 44, iss. 9, pp. 1562-1571, 2006.

J. Tressou, "Non Parametric Modelling of the Left Censorship of Analytical Data in Food Risk Exposure Assessment," Journal of the American Statistical Association, vol. 101, iss. 476, pp. 1377-1386, 2006.

[2006, article | www]

C. Cérin, J.-L. Gaudiot, and M. Koskas, "A multithreaded SQL service," Parallel Processing Letter, vol. 16, iss. 2, pp. 245-260, 2006.

[2006, article | www]

M. Koskas, "Sequential In-core Sorting Performance for a SQL Data Service and for Parallel Sorting on Heterogneous Clusters," Special issue of Future Generation Computer Systems journal, vol. 22, pp. 776-783, 2006.

**2005**

[2005, article]

C. Cérin and M. Koskas, "Mining Traces of Large Scale Systems," Proceedings of Lecture Notes in Computer Science, vol. ISBN : 3-540-29235-7, iss. 3719, pp. 132-138, 2005.

[2005, article]

F. Mortier, S. Robin, S. Lassalvy, C. P. Baril, and A. Bar-Hen, "Prediction of Euclidean distances with discrete and continuous outcomes," JMVA, vol. 97, iss. 8, pp. 1799-1814, 2005.

[2005, article]

S. Ledent and S. Robin, "Checking homogeneity of patterns distribution in heterogeneous sequences," JCB, vol. 12, iss. 6, pp. 672-85, 2005.

[2005, article]

E. Lebarbier, "Detecting Multiple Change-Points in the Mean of Gaussian Process by Model Selection," Signal Processing, vol. 85, pp. 717-736, 2005.

[2005, article | www]

M.-L. Martin-Magniette, J. Aubert, E. Cabannes, and J.-J. Daudin, "Answer to the comments of K. Dobbin, J. Shih and R. Simon on the paper `Evaluation of the gene-specific dye-bias in cDNA microarray experiments'," Bioinformatics, vol. 21, iss. 14, pp. 3065-3065, 2005.

[2005, article | www]

M. Giral, J. M. Nguyen, G. Karam, M. Kessler, B. H. de Ligny, M. Buchler, F. Bayle, C. Meyer, Y. Foucher, M.-L. Martin, P. Daguin, and J. P. Soulillou, "Impact of Graft Mass on the Clinical Outcome of Kidney Transplants," J Am Soc Nephrol, vol. 16, iss. 1, pp. 261-268, 2005.

[2005, article | www]

F. Jammes, P. Lecomte, J. de Almeida-Engler, F. Bitton, M.-L. Martin-Magniette, J.-P. Renou, P. Abad, and B. Favery, "Genome-wide expression profiling of the host response to root-knot nematode infection in Arabidopsis.," Plant Journal, vol. 44, iss. 3, pp. 447-458, 2005.

[2005, article | www]

M.-L. Martin-Magniette, "Non-parametric estimation of the hazard function using a model selection method: estimation of cancer death in Hiroshima A-bomb survivors.," JRSS, serie C, vol. 54, pp. 31-50, 2005.

[2005, article | www]

D. Grancher, L. Bel, and R. Vautard, "Estimation de champs de pollution par adaptation statistique locale et approche non stationnaire," Journal Européen des Systèmes Automatisés, vol. 39, iss. 4, pp. 475-492, 2005.

[2005, article | www]

C. M. Hurvich, G. Lang, and P. Soulier, "Estimation of long memory in the presence of a smooth non parametric trend," J. Amer. Stat. Ass., vol. 100, iss. 471, pp. 853-871, 2005.

[2005, article | www]

F. Picard, S. Robin, M. Lavielle, C. Vaisse, and J.-J. Daudin, "A statistical approach for array CGH data analysis," BMCB, vol. 6, iss. 27, p. 1, 2005.

[2005, article | www]

P. Delmar, S. Robin, D. Le Roux, and J.-J. Daudin, "Mixture model on the variance for the differential analysis of gene expression," JRSSC, vol. 54, iss. 1, pp. 31-50, 2005.

[2005, article | www]

S. Ledent and S. Robin, "Checking homogeneity of patterns distribution in heterogeneous sequences," JCB, vol. 12, iss. 6, pp. 672-85, 2005.

[2005, article | www]

C. Hennequet-Antier, H. Chiapello, K. Piot, S. Degrelle, I. Hue, J.-P. Renard, F. Rodolphe, and S. Robin, "AnovaArray: a set of SAS macros for the analysis of variance of gene expression data," BMCB, vol. 6, iss. 150, p. 1, 2005.

[2005, article]

T. Lorino, J.-J. Daudin, S. Robin, and M. Sanaa, "Factors associated with time to neonatal diarrhoea in French beef calves," Prevent. Veterin. Med., vol. 68, iss. 2-4, pp. 91-102, 2005.

[2005, article | www]

P. Delmar, S. Robin, and J.-J. Daudin, "VarMixt : Efficient variance modelling for the differential analysis of replicated gene expression data," Bioinformatics, vol. 21, iss. 4, pp. 502-8, 2005.

[2005, article | www]

M.-L. Martin-Magniette, J. Aubert, E. Cabannes, and J.-J. Daudin, "Evaluation of the gene-specific dye bias in cDNA microarray experiments," Bioinformatics, vol. 21, iss. 9, pp. 1995-2000, 2005.

[2005, article | www]

D. Sauvant, P. Schmidely, and J.-J. Daudin, "Meta-analysis of experimental data : application in animal nutrition," PRODUCTIONS ANIMALES, vol. 18, iss. 1, pp. 63-73, 2005.

[2005, article | www]

P. Rouillier, M.-C. Boutron-Ruault, S. Bertrais, and J.-J. Daudin, "Alcohol and atherosclerotic vascular disease risk factors in French men: Relationships are linear, J-shaped, and U-shaped," ALCOHOLISM-CLINICAL AND EXPERIMENTAL RESEARCH, vol. 29, iss. 1, pp. 84-88, 2005.

A. Crépet, J. Tressou, P. Verger, and J. Leblanc, "Management options to reduce exposure to methyl mercury through the consumption of fish and fishery products by the French population," Regulatory Toxicology and Pharmacology, vol. 42, iss. 2, pp. 179-189, 2005.

P. Verger, E. Counil, J. Tressou, and J. C. Leblanc, "Some recent advances in modelling dietary exposure to ochratoxin A," Food Additive and Contaminant, vol. 22, iss. S1, pp. 94-98, 2005.

[2005, article | www]

D. Surgailis, P. Doukhan, G. Lang, and M.-C. Viano, "Functional limit theorem for the empirical process of a class of Bernoulli shifts with long memory," J. Theo. Prob., vol. 18, iss. 1, pp. 109-134, 2005.

[2005, article | www]

M. Koskas, "Shortest Paths un Unweighed Graphs," Annales du LAMSADE, vol. 4-5, pp. 307-332, 2005.

[2005, article | www]

M. C. Koskas Michel, "Flows!," Annales du LAMSADE, vol. 4--5, pp. 333-355, 2005.

**2004**

[2004, article]

C. Cérin, J.-S. Gay, G. Le Mahec, and M. Koskas, "Efficient Data-Structures and Parallel Algorithms For Association Rules Discovery," IEEE-CS PRESS, iss. ISBN 0-7695-2160-6, pp. 399-407, 2004.

[2004, article]

C. Cérin, H. Fkaier, M. Jemni, and M. Koskas, "Improving Parallel Execution Time of Sorting on Heterogeneous Clusters," IEEE-CS Press, vol. ISBN 0-7695-2240-8, pp. 180-187, 2004.

[2004, article]

G. Mercier, N. Berthault, J. Mary, A. Antoniadis, J.-P. Comet, A. Cornuéjols, C. Froidevaux, and M. Dutreix, "Biological detection of low radiation by combining results of two analysis methods," Nucleic Acids Research (NAR), vol. 32, iss. 1, pp. 1-8, 2004.

[2004, article | www]

J. Aubert, A. Bar-Hen, J.-J. Daudin, and S. Robin, "Determination of the differentially expressed genes in microarray experiments using local FDR," BMC BIOINFORMATICS, vol. 5, iss. 125, 2004.

[2004, article | www]

M. Koskas, "A Hierarchical Data Base Management Algorithm," Annales du LAMSADE, vol. 2, pp. 277-317, 2004.

[2004, article | www]

F. Durand, A. Guerziz, and M. Koskas, "Words and Morphisms with Sturmian Erasures," Bull. Belg. Math. Soc., vol. 11, iss. 4, pp. 575-588, 2004.

[2004, article]

M. P. Etienne and P. Vallois, "Approximation of the distribution of the supremum of a centred random walk. Application to the local score," Methodol. Comput. Appl. Probab., vol. 6, iss. 3, pp. 255-275, 2004.

[2004, article]

T. Lorino, M. Sanaa, S. Robin, and J.-J. Daudin, "Comparison of semiparametric regression models for correlated survival data," CSS, vol. 33, iss. 8, pp. 1944-1975, 2004.

[2004, article | www]

T. Mary-Huard, S. Robin, J. J. Daudin, F. Bitton, E. Cabannes, and P. Hilson, "Spotting effect in microarray experiments," BMCB, vol. 5, iss. 63, pp. 1-9, 2004.

[2004, article | www]

A. Bar-Hen and J. J. Daudin, "A simple goodness-of-fit test for parametric regression models," COMMUNICATIONS IN STATISTICS-THEORY AND METHODS, vol. 33, iss. 6, pp. 1357-1370, 2004.

[2004, article | www]

C. Lurin, C. Andres, S. Aubourg, M. Bellaoui, F. Bitton, C. Bruyere, M. Caboche, C. Debast, J. Gualberto, B. Hoffmann, A. Lecharny, M. Le Ret, M.-L. Martin-Magniette, H. Mireau, N. Peeters, J.-P. Renou, B. Szurek, L. Taconnat, and I. Small, "Genome-Wide Analysis of Arabidopsis Pentatricopeptide Repeat Proteins Reveals Their Essential Role in Organelle Biogenesis," Plant Cell, vol. 16, iss. 8, pp. 2089-2103, 2004.

J. Tressou, A. Crépet, P. Bertail, M. H. Feinberg, and J. C. Leblanc, "Probabilistic exposure assessment to food chemicals based on Extreme Value Theory. Application to heavy metals from fish and sea products," Food Chemical and Toxicology, vol. 42, iss. 8, pp. 1349-1358, 2004.

J. Tressou, J. C. Leblanc, M. Feinberg, and P. Bertail, "Statistical methodology to evaluate food exposure and influence of sanitary limits: Application to Ochratoxin A," Regulatory Toxicology and Pharmacology, vol. 40, iss. 3, pp. 252-263, 2004.

[2004, article]

P. Rouillier, M.-C. Boutron-Ruault, S. Bertrais, and J. J. Daudin, "Drinking patterns in French adult men A cluster analysis of alcoholic beverages and relationship with lifestyle," EUROPEAN JOURNAL OF NUTRITION, vol. 43, iss. 2, pp. 69-76, 2004.

**2003**

[2003, article | www]

C. Epifanio, M. Koskas, and F. Mignosi, "About a Nivat?s Conjecture," Theoretical Computer Science, vol. 299, iss. 1--3, pp. 123-150, 2003.

[2003, article | www]

M. Koskas, "A hierarchical Algorithm to Solve the Shortest Path Problem in Valued Graphs," CoRR cs.DS/0310019, 2003.

[2003, article]

P. Petitgas, J. Massé, P. Bellois, E. Lebarbier, and A. Le Cann, "The sampling variance of species identification in fisheries acoustic surveys based on automated procedures associating acoustic images and trawl hauls," Journal ICES Journal of Marine Science, vol. 60, pp. 437-445, 2003.

[2003, article | www]

N. Blond, L. Bel, and R. Vautard, "Three-dimensional ozone data analysis with an air quality model over Paris area," Journal of Geophysical Research, vol. 108, iss. D23, p. 4744, 2003.

[2003, article]

S. Robin, "La juste mesure des gènes," La Recherche, vol. 363, pp. 90-91, 2003.

[2003, article]

G. Mouille, S. Robin, M. Lecomte, S. Pagant, and H. H., "Classification and identification of Arabidopsis cell wall mutants using Fourier Transfrom Infrared (FT-IR) microspectroscopy," The Plant J., pp. 393-404, 2003.

[2003, article]

S. Robin, M. Lecomte, H. Höfte, and G. Mouille, "A procedure for the clustering of cell wall mutants in the model plant Arabidopsis based on Fourier-Transform InfraRed FT-IR spectroscopy," JAS, vol. 30, iss. 6, pp. 669-681, 2003.

[2003, article]

A. Bar-Hen and S. Robin, "An iterative procedure for differential analysis of gene expression," CRAS, pp. 343-346, 2003.

[2003, article]

J. J. Daudin, M. P. Etienne, and P. Vallois, "Asymptotic behavior of the local score of independent and identically distributed random sequences," Stochastic Processes and their Applications, vol. 107, iss. 1, 2003.

[2003, article | www]

M.-E. Lafargue, M. Feinberg, J. J. Daudin, and D. Rutledge, "Detection of heterogeneous wheat samples using near infrared spectroscopy," JOURNAL OF NEAR INFRARED SPECTROSCOPY, vol. 11, iss. 2, pp. 109-121, 2003.

[2003, article | www]

M.-E. Lafargue, M. Feinberg, J. J. Daudin, and D. Rutledge, "Homogeneity check of agricultural and food industries samples using near infrared spectroscopy," ANALYTICAL AND BIOANALYTICAL CHEMISTRY, vol. 375, iss. 4, pp. 496-504, 2003.

[2003, article | www]

K. Chaouche, G. Lang, and P. Hubert, "Graphical characterisation of probability distribution tails," Stoch. Env. Res. and Risk Assess., vol. 16, iss. 5, pp. 342-357, 2003.

**2002**

[2002, article]

J.-N. Bacro, J.-J. Daudin, S. Mercier, and S. Robin, "Back to the local score in the logarithmic case: a direct and simple proof," AISM, vol. 54, pp. 748-757, 2002.

[2002, article | www]

S. Robin, J.-J. Daudin, H. Richard, M.-F. Sagot, and S. Schbath, "Occurrence probability of structured motifs in random sequences," Journal of Computational Biology, vol. 9, pp. 761-773, 2002.

[2002, article]

S. Robin, "A compound Poisson model for words occurrences in DNA sequences," JRSSC, vol. 51, pp. 437-451, 2002.

[2002, article | www]

P. Doukhan and G. Lang, "Rates in the empirical central limit theorem for stationary weakly dependent random fields," Stat. Inf. Stoc. Pro., vol. 5, iss. 2, pp. 199-228, 2002.

[2002, article | www]

D. Surgailis, P. Doukhan, and G. Lang, "Asymptotics of empirical processes of linear random fields with long-range dependence.," Ann. Inst. Henri Poincaré, Série Probabilités et Statistiques, vol. 38, iss. 6, pp. 879-896, 2002.

**2001**

[2001, article]

M. Lavielle and E. Lebarbier, "An application of MCMC methods for the multiple change-points problem," Signal Processing, vol. 81, pp. 39-53, 2001.

[2001, article | www]

S. Robin and J.-J. Daudin, "Exact distribution of the distances between any occurrences of a set of words," Annals of the Institute of Statistical Mathematics, vol. 53, iss. 4, pp. 895-905, 2001.

[2001, article | www]

S. Mercier and J.-J. Daudin, "Exact distribution for the local score of one i.i.d. random sequence," JOURNAL OF COMPUTATIONAL BIOLOGY, vol. 8, iss. 4, pp. 373-380, 2001.

[2001, article | www]

S. Mercier, D. Cellier, F. Charlot, and J.-J. Daudin, "Exact and Asymptotic distribution of the local score of one i.i.d. random sequence," Lecture Notes in Computer Science, vol. 2066, pp. 74-83, 2001.

[2001, article]

S. Robin and S. Schbath, "Numerical comparison of several approximations of the word count distribution in random sequences," JCB, vol. 8, iss. 4, pp. 349-359, 2001.

[2001, article | www]

A. Sekowska, S. Robin, J.-J. Daudin, A. Hénaut, and A. Danchin, "Extracting biological information from DNA arrays : an unexpected link between arginine and methionine metabolism in Bacillus subtilis," Genome Biology, vol. 2, iss. 6, 2001.

[2001, article]

G. Nuel, S. Robin, and C. Baril, "Predicting phenotypic distances using a linear model: the case of varietal distinctness," JAS, vol. 28, iss. 5, pp. 607-621, 2001.

[2001, article]

G. Nuel, C. Baril, and S. Robin, "Varietal distinctness assisted by molecular markers : A methodological approach," Acta Horticulturae, vol. 546, pp. 65-71, 2001.

[2001, article | www]

F. Roueff and G. Lang, "Semi-parametric estimation of the Hölder exponents of stationary Gaussian processes with minimax rates," Stat. Inf. Stoc. Pro., vol. 4, iss. 3, pp. 283-306, 2001.

**2000**

[2000, article | www]

B. de Mathan, J. Fresnel, and M. Koskas, "Automata and Transcendance," Journal of Number Theory, vol. 80, iss. 1, pp. 1-24, 2000.

[2000, article | www]

J.-M. Bardet, G. Lang, E. Moulines, and P. Soulier, "Wavelet Estimator of Long-Range Dependent Processes," Stat. Inf. Stoc. Pro., vol. 3, iss. 1/2, pp. 85-99, 2000.

[2000, article]

A. Cornuéjols, A. Tiberghien, and G. Collet, "A new mechanism for transfer between conceptual domains in scientific discovery and education," Foundations of Science, vol. 5, iss. 2, pp. 129-155, 2000.

[2000, article | www]

G. Lang and P. Soulier, "Convergence de mesures spectrales aléatoires et applications à des principes d’invariance," Stat. Inf. Stoc. Pro., vol. 3, iss. 1/2, pp. 41-51, 2000.

**1999**

[1999, article | www]

G. Lang and J.-M. Azaïs, "Non parametric estimation of the long range dependence exponent for Gaussian processes," J.Stat. Pl. Inf., vol. 80, iss. 1-2, pp. 59-80, 1999.

[1999, article | www]

S. Robin and J. Daudin, "Exact Distribution of word occurrences in a random sequence of letters," J. Appl. Prob., vol. 36, pp. 179-193, 1999.

[1999, article]

J. Daudin and A. Bar-Hen, "Selection in discriminant analysis with continuous and discrete variables," COMPUTATIONAL STATISTICS & DATA ANALYSIS, vol. 32, pp. 161-175, 1999.

[1999, article]

J. Daudin and S. Mercier, "Exact distribution for the local score of independent and identically distributed random sequence," COMPTES RENDUS DE L ACADEMIE DES SCIENCES SERIE I-MATHEMATIQUE, vol. 329, pp. 815-821, 1999.

**1998**

[1998, article]

A. Bar-Hen and J.-J. Daudin, "Asymptotic distribution of Matusita's distance: Application to the location model," Biometrika, vol. 85, iss. 2, pp. 477-481, 1998.

[1998, article | www]

M. Koskas, "Complexités de suites de Toeplitz," Discrete Mathematics, vol. 183, iss. 1--3, pp. 161-183, 1998.

**1997**

[1997, article]

A. Bar-Hen and J.-J. Daudin, "A test of a special case of typicality in linear discriminant analysis," BIOMETRICS, vol. 53, iss. 1, pp. 39-48, 1997.

[1997, article | www]

C. Laugier, G. Lang, V. Mary, and E. Parent, "Modélisation d'une politique d'autocontrôle sur un réseau d'eau potable," Rev. Sci. Eau, vol. 12, iss. 1, pp. 201-217, 1997.

[1997, article | www]

J. Istas and G. Lang, "Quadratic variations and estimation of the local Hölder index of a Gaussian process," Ann. Inst. Henri Poincaré, Série Probabilités et Statistiques, vol. 33, iss. 4, pp. 407-436, 1997.

**1996**

[1996, article | www]

J.-J. Daudin, "Study on amplitude of a Bernoulli random walk," RAIRO-RECHERCHE OPERATIONNELLE-OPERATIONS RESEARCH, vol. 30, iss. 1, pp. 99-106, 1996.

[1996, article | www]

M. Koskas, "About the $p$-Paperfolding Words," Theoretical Computer Science, vol. 1 \& 2, iss. 158, pp. 35-51, 1996.

**1995**

[1995, article | www]

J.-J. Daudin, "GENERALIZATION OF THE MAHALANOBIS DISTANCE IN THE MIXED CASE," JOURNAL OF MULTIVARIATE ANALYSIS, vol. 53, iss. 2, pp. 332-342, 1995.

**1994**

[1994, article | www]

L. Orsini, J.-J. Daudin, and A. P. Bermond, "COPPER BIOAVAILABILITY IN CALCAREOUS SOIL SAMPLES. RELATION TO THE CHEMICAL FRACTIONATION OF COPPER," ENVIRONMENTAL TECHNOLOGY, vol. 11, pp. 1061-1068, 1994.

**1992**

[1992, article | www]

J.-J. Daudin, "DOUBLE SAMPLING (X)BAR CHARTS," JOURNAL OF QUALITY TECHNOLOGY, vol. 24, iss. 2, pp. 78-87, 1992.

**1991**

[1991, article | www]

V. LAVERGNE, M. LEFORTBUSON, J.-J. DAUDIN, A. CHARCOSSET, J.-P. SAMPOUX, and A. GALLAIS, "GENETIC-VARIABILITY AMONG POPULATIONS OF MAIZE GERMPLASM .1. COMPARATIVE-ANALYSIS OF TOP CROSS VALUES AND PER SE VALUES OF POPULATIONS," MAYDICA, vol. 36, iss. 3, pp. 227-236, 1991.

[1991, article | www]

V. LAVERGNE, M. LEFORTBUSON, J.-J. DAUDIN, A. CHARCOSSET, J.-P. SAMPOUX, and A. GALLAIS, "GENETIC-VARIABILITY AMONG POPULATIONS OF MAIZE GERMPLASM .2. ENZYMATIC POLYMORPHISM AND ITS RELATIONSHIP TO QUANTITATIVE TRAIT DIVERSITY," MAYDICA, vol. 36, iss. 3, pp. 237-246, 1991.

**1989**

[1989, article | www]

J.-J. DAUDIN, "CORRESPONDENCE-ANALYSIS OF LONGITUDINAL CATEGORICAL-DATA VANDERHEIJDEN,PGM," PSYCHOMETRIKA, vol. 54, iss. 1, pp. 165-166, 1989.

[1989, article | www]

J.-J. Daudin, C. Duby, and P. Trécourt, "PCA studied by the bootstrap and the infinitesimal jackknife method," Statistics, vol. 20, iss. 2, pp. 265-270, 1989.

**1988**

[1988, article | www]

J.-J. Daudin, C. Duby, and P. Trécourt, "Stability of principal component analysis studied by the bootstrap method," Statistics, vol. 19, pp. 241-258, 1988.

**1986**

[1986, article | www]

J.-J. DAUDIN, "SELECTION OF VARIABLES IN MIXED-VARIABLE DISCRIMINANT-ANALYSIS," BIOMETRICS, vol. 42, iss. 3, pp. 473-481, 1986.

**1985**

[1985, article | www]

E. AGOSIN, J.-J. DAUDIN, and E. ODIER, "SCREENING OF WHITE-ROT FUNGI ON (C-14)LIGNIN-LABELLED AND (C-14)WHOLE-LABELLED WHEAT STRAW," APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, vol. 22, iss. 2, pp. 132-138, 1985.

[1985, article | www]

G. BARBAISE, S. CORRE, and J.-J. DAUDIN, "MARKETING DECISION AND SELECTION ON INDEXING," REVUE FRANCAISE DU MARKETING, vol. 99B, iss. 4, pp. 94-110, 1985.

**1984**

[1984, article | www]

C. TOURNEUR and J.-J. DAUDIN, "SELECTION OF MICROCOCCACEAE FOR THEIR UTILIZATION IN CHEESE-MAKING," LATTE, vol. 9, iss. 10, pp. 790-794, 1984.

**1983**

[1983, article | www]

J.-L. SCHMIDT and J.-J. DAUDIN, "STUDY ON THE HOMOGENEITY OF A POPULATION OF YEASTS ISOLATED FROM CAMEMBERT CHEESES," ANNALES DE MICROBIOLOGIE, vol. A134, iss. 3, pp. 399-409, 1983.

**1980**

[1980, article | www]

J.-J. DAUDIN, "PARTIAL ASSOCIATION MEASURES AND AN APPLICATION TO QUALITATIVE REGRESSION," BIOMETRIKA, vol. 67, iss. 3, pp. 581-590, 1980.

### 1979

[1979, article | www]

J.-J. DAUDIN, "ITERATIVE ALGORITHM FOR ANALYSIS OF VARIANCE," INTERNATIONAL JOURNAL OF BIO-MEDICAL COMPUTING, vol. 10, iss. 6, pp. 507-518, 1979.