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BioEpAR Publications

Recent publications of BioEpAR, in line with MIHMES.
  • Beaudeau F., Belliard M., Joly A., Seegers H. 2007. Reduction in milk yield associated with Mycobacterium avium subspecies paratuberculosis (Map) infection in French dairy cows. Veterinary Research 38, 625-634. DOI: 10.1051/vetres:2007021.
  • Beaudeau F., Björkman C., Alenius S., Frössling J. 2010. Spatial patterns of Bovine Corona Virus and Bovine Respiratory Syncytial Virus in the Swedish beef cattle population. Acta Veterinaria Scandinavica, 52, 33. DOI: 10.1186/1751-0147-52-33.
  • Beaudeau F., Ohlson A., Emanuelson U. 2010. Associations between Bovine Coronavirus and Bovine Respiratory Syncytial Virus infections and animal performance in Swedish dairy herds. Journal of Dairy Science, 93, 1523-1533. DOI: 10.3168/jds.2009-2511.
  • Courcoul A., Ezanno P. 2010. Modelling the spread of bovine viral diarrhoea virus (BVDV) in a managed metapopulation of cattle herds. Veterinary Microbiology, 142, 119-128. DOI: 10.1016/j.vetmic.2009.09.052.
  • Courcoul A., Vergu E., Denis JB., Beaudeau F. 2010. Spread of Q fever within dairy cattle herds: key parameters inferred using a Bayesian approach. Proc. Royal Society London B., 277, 2857-2865. DOI: 10.1098/rspb.2010.0575.
  • Ducrot C., Pécaud D., Petit E., Krebs S., Viet A.F., Durand B., Biteau-Coroller F., Beaudeau F., Frappat B., Calavas D., Fourichon C. 2010. Qualification sanitaire des troupeaux, représentations du risque selon les acteurs et les disciplines. Natures, Sciences, Sociétés, 18, 3-13. DOI: 10.1051/nss/2010002%20.
  • Ezanno P., Fourichon C., Beaudeau F., Seegers H., 2006. Between-herd movements of cattle in Bretagne and risk of introducing infected animals. Animal Research 55, 189-208. DOI: 10.1051/animres:2006013.
  • Ezanno P., Fourichon C., Seegers H., 2008.  Influence of herd structure and type of virus introduction on the spread of bovine viral diarrhoea virus (BVDV) within a dairy herd. Veterinary Research 39:39. DOI: 10.1051/vetres:2008016%20.
  • Ezanno P., Fourichon C., Viet A-F., Seegers H. 2007. Sensitivity analysis to identify key-parameters in modelling the spread of bovine viral diarrhoea virus in a dairy herd. Preventive Veterinary Medicine 80, 49-64. DOI: 10.1016/j.prevetmed.2007.01.005.
  • Ezanno P., Lesnoff M. 2009. A metapopulation model for the spread and persistence of contagious bovine pleuropneumonia (CBPP) in African sedentary mixed crop-livestock systems. Journal of Theoretical Biology, 256, 493-503. DOI: 10.1016/j.jtbi.2008.10.001.
  • Fosse J., Laroche M., Oudot N., Seegers H., Magras C.  2010. On-farm multi-contamination of pigs by food-borne bacterial zoonotic hazards: an exploratory study. Veterinary Microbiology, 147, 209-213 . DOI: 10.1016/j.vetmic.2010.06.013.
  • Fosse J., Seegers H., Magras C. 2009. Prevalence and risk factors for bacterial foodborne zoonotic hazards in slaughter pigs: a review. Zoonoses and Public Health, 56, 429-454. DOI: 10.1111/j.1863-2378.2008.01185.x.
  • Fosse J., Seegers H., Magras C., 2008. Foodborne zoonoses due to meat: a quantitative approach for a comparative risk assessment applied to pig slaughtering in Europe. Veterinary Research 39:01. DOI: 10.1051/vetres:2007039.
  • Fosse J., Seegers H., Magras C., 2008. Hiérarchiser les risques de zoonoses alimentaires : une approche quantitative. Application aux dangers bactériens transmis par les viandes porcine et bovine. Revue Scientifique et Technique de l'OIE 27:3, 643-655.
  • Gaucel S., Laroche B., Ezanno P., Vergu E., Touzeau S. 2009. Using singular perturbations to reduce an epidemiological model: application to Bovine Viral Diarrhoea Virus (BVDV) within-herd spread. Journal of Theoretical Biology, 258, 426-436. DOI: 10.1016/j.jtbi.2008.08.011.
  • Guatteo R., Beaudeau F., Berri M., Rodolakis A., Joly A., Seegers H. 2006. Shedding routes of Coxiella burnetii in dairy cows: implications for detection and control. Veterinary Research 37, 827-833. DOI: 10.1051/vetres:2006038.
  • Guatteo R., Beaudeau F., Joly A., Seegers H. 2007. Assessing the within-herd prevalence of Coxiella burnetii milk shedder cows using a real-time PCR applied to bulk tank milk. Journal of Veterinary Medicine B, 54, 191-194. DOI: 10.1111/j.1863-2378.2007.01043.x.
  • Guatteo R., Beaudeau F., Joly A., Seegers H. 2007. Coxiella burnetii shedding by dairy cows. Veterinary Research 38, 849-860. DOI: 10.1051/vetres:2007038.
  • Guatteo R., Beaudeau F., Joly A., Seegers H. 2007. Performances of an ELISA applied to serum and milk for the detection of antibodies to Coxiella burnetii in dairy cattle. Revue de Médecine Vétérinaire 158, 250-252.
  • Guatteo R., Beaudeau F., Ledoux D., Le Dréan E., Seegers H. 2007. Risk of false-negative results when delaying PCR from sampling for Coxiella burnetii’s detection in dairy cows. Revue de Médecine Vétérinaire 158, 641-644.
  • Guatteo R., Seegers H., Joly A., Beaudeau F. 2008. Prevention of Coxiella burnetii shedding in infected dairy herds using a phase I Coxiella burnetii inactivated vaccine. Vaccine 26, 4320-4328. DOI: 10.1016/j.vaccine.2008.06.023.
  • Guatteo R., Seegers H., Taurel A-F., Joly A., Beaudeau F. 2010.  Prevalence of Coxiella burnetii infection in domestic ruminants: A critical review. Veterinary Microbiology, . DOI: 10.1016/j.vetmic.2010.10.007
  • Hoch T., Fourichon C., Viet A.-F., Seegers H., 2008. Influence of the transmission function on a simulated pathogen spread within a population. Epidemiology and Infection 136(10), 1374-1382. DOI: 10.1017/S095026880700979X.
  • Hoch T., Monnet Y., Agoulon A. 2010.  Influence of host migration between woodland and pasture on the population dynamics of the tick Ixodes ricinus: a modelling approach. Ecological Modelling, 221, 1798-1806. DOI: 10.1016/j.ecolmodel.2010.04.008.
  • Jacob C., Viet A.F. 2007. A new class of processes for formalizing and generalizing individual-based models: the semi-semi-Markov processes. Pliska Studia Mathematica Bulgarica, vol.18, 121-144. (Numéro spécial, proceeding of XIIthISCPS)
  • Jesse M., Ezanno P., Davis S., Heesterbeek J.A.P., 2008. A fully coupled, mechanistic model for infectious disease dynamics in a metapopulation: movements and epidemic duration. Journal of Theoretical Biology 254, 331-338.
  • Lurette A., Belloc C., Touzeau S., Hoch T., Ezanno P., Seegers H., Fourichon C. 2008. Modelling Salmonella spread within a farrow-to-finish pig herd. Veterinary Research 39:49. DOI: 10.1016/j.jtbi.2008.05.038.
  • Lurette A., Belloc C., Touzeau S., Hoch T., Seegers H., Fourichon C. 2008. Modelling batch farrowing management within a farrow-to-finish pig herd: influence of management on contact structure and pig delivery to the slaughterhouse. Animal 2(1), 105-116. DOI: 10.1017/S1751731107000997.
  • Lurette A., Touzeau S., Lamboni M., Monod H., 2009. Sensitivity analysis to identify key parameters influencing Salmonella infection dynamics in a pig batch. Journal of Theoretical Biology, 258, 43-52. DOI: 10.1016/j.jtbi.2009.01.026.
  • Marcé C., Beaudeau F., Bareille N., Seegers H., Fourichon C., 2009. Higher non-return rate associated with Mycobacterium avium subspecies paratuberculosis infection at early stage in Holstein dairy cows. Theriogenology, 71, 807-816. DOI: 10.1016/j.theriogenology.2008.10.017.
  • Marcé C., Ezanno P., Weber M.F., Seegers H., Pfeiffer D., Fourichon C. 2010. Modeling within-herd transmission of Mycobacterium avium subspecies paratuberculosis in dairy cattle: A review. Journal of Dairy Science, 93, 4455-4470. DOI: 10.3168/jds.2010-3139.
  • Marcé C., Guatteo R., Bareille N., Fourichon C. 2010. Dairy calf housing systems across Europe and risk for calf infectious diseases. Animal, 4:9, 1588-1596. DOI: 10.1017/S1751731110000650.
  • Mercier P., Baudry C., Beaudeau F., Seegers H., Malher X. 2010. Estimated prevalence of Mycobacterium avium subspecies paratuberculosis infection in herds of dairy goats in France. Veterinary Record 167, 412-415. DOI: 10.1136/vr.c4454.
  • Rat-Aspert O., Fourichon C. 2010. Modelling collective effectiveness of voluntary vaccination with and without incentives. Preventive Veterinary Medicine 93(4):265-275. DOI: 10.1016/j.prevetmed.2009.11.004.
  • Rodolakis A., Clement P., Cochonneau D., Beaudeau F., Sarradin P., Guatteo R. 2009. Investigation of humoral and cellular immunity of dairy cattle after one or two year of vaccination with a phase I Coxiella vaccine. Procedia in Vaccinology, 1(1), 85-89. 2nd Vaccine Global Congress – Boston 2008. DOI: 10.1016/j.provac.2009.07.015.
  • Taurel A.-F., Guatteo R., Joly A., Beaudeau F. 2012. Effectiveness of vaccination and antibiotics to control Coxiella burnetii shedding around calving in dairy cows. Veterinary Microbiology 159(3-4), 432-437. DOI: 10.1016/j.vetmic.2012.04.027.
  • Vergu E., Busson H., Ezanno P. 2010. Impact of the infection period distribution on the epidemic spread in a metapopulation model. PLoS ONE, 5(2):e9371. DOI: 10.1371/journal.pone.0009371.
  • Viet A.-F., Fourichon C., Seegers H. 2006. Simulation study to assess the efficiency of a test-and-cull scheme to control the spread of the bovine viral-diarrhoea virus in a dairy herd. Preventive Veterinary Medicine 76, 151-166. DOI: 10.1016/j.prevetmed.2006.04.013.
  • Viet A.-F., Fourichon C., Seegers H. 2007. Review and critical discussion of modelling options to study the spread of the bovine viral-diarrhoea virus (BVDV) within a cattle herd. Epidemiology and Infection 135, 706-721. DOI: 10.1017/S095026880600745X.
  • Viet A.-F., Fourichon C., Seegers H., Jacob C., Guihenneuc-Jouyaux C. 2006. Approach for qualitative validation using aggregated data for a stochastic simulation model of the spread of the Bovine Viral-Diarrhoea Virus in a dairy cattle herd. Acta Biotheoretica 54, 207-217. DOI: 10.1007/s10441-006-8226-8.
  • Viet A.-F., Jacob C. 2008. Illustration of some limits of the Markov assumption for transition between groups in models of spread of an infectious pathogen in a structured herd. Theoretical Population Biology 74, 93-103. DOI: 10.1016/j.tpb.2008.05.002.
  • Viet A.-F., Krebs S. 2010. Bovine viral diarrhoea virus: Economic evaluation of outbreaks by modelling. Guest editorial (Guest editorial, invited paper), The veterinary Journal 185, 103-104. DOI: 10.1016/j.tvjl.2009.09.018.
  • Viet A.-F., Medley G.F. 2006. Stochastic dynamics of immunity in small populations: a general framework. Mathematical Biosciences 200, 28-43. DOI: 10.1016/j.mbs.2005.12.027.
  • Zongo P., Viet A.-F., Magal P., Beaumont C., 2010. A spatio-temporal model to describe the spread of Salmonella within a laying flock. The Journal of Theoretical Biology 267, 595-604. DOI: 10.1016/j.jtbi.2010.09.030.